Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq1324 89.7 4e-13 >seq1324 Length=11587733 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || |||||||| |||| || ||| | ||||||||||||||||| | || Sbjct 8091626 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAA 8091567 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | | |||||| || || | || |||||||||| || || ||| | | Sbjct 8091566 ATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTT 8091507 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | |||| ||||| || ||||| || ||||| || |||||||| Sbjct 8091506 TCGATGGTGTCACTGGGCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAGGGTTTTCACG 8091447 Query 48716 AAAATCTGCATC 48727 || ||||||||| Sbjct 8091446 AAGATCTGCATC 8091435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421060749173096