Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1324 95.1 1e-14 >seq1324 Length=11587733 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || |||||||| || || || || ||| || || || || ||| Sbjct 8089008 GTTGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTGCCA 8088949 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| ||||| |||||||| ||||| ||||| || Sbjct 8088948 GCAAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 8088889 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | || | || ||||||||||| || Sbjct 8088888 ACATTCTCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCGGTCAGGGTC 8088829 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 8088828 TTCACAAAGATCTGCAT 8088812 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || || |||||| || || |||||| Sbjct 8089236 GTTGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCTTCCAGCTGCTTACCA 8089177 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || ||||||||||| ||||| ||||| || Sbjct 8089176 GCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTG 8089117 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| || || || | || | || ||||||||||| || Sbjct 8089116 ACATTCTCGATGGTGTCACTGGGCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAGGGTC 8089057 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 8089056 TTCACAAAGATCTGCAT 8089040 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| || || || |||||| || || || ||| Sbjct 8091860 GTTGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 8091801 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || || | ||| ||||| || ||||||||||| ||||| ||||| || Sbjct 8091800 GCGAAAATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 8091741 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| || || |||| ||| | || ||||| ||||| || Sbjct 8091740 ACATTCTCGATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTC 8091681 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 8091680 TTCACGAAGATCTGCAT 8091664 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||| || || || || ||| || || || |||||| Sbjct 8091632 GTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTACCA 8091573 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || | || || | ||| ||||| ||||| || ||||| ||||| ||||| || Sbjct 8091572 GCAAAAATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTC 8091513 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | |||||| ||| || || || | || | || ||||||||||| ||| Sbjct 8091512 ACATTTTCGATGGTGTCACTGGGCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAGGGTT 8091453 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 8091452 TTCACGAAGATCTGCAT 8091436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419944454086752