Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_009514.1 Length=47021 Score E Sequences producing significant alignments: (Bits) Value seq458 219 1e-52 >seq458 Length=112617285 Score = 219 bits (242), Expect = 1e-52 Identities = 233/302 (77%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 14307 GCCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCGGTGCCGAATCATGCCGCCATTTA 14366 ||| ||| |||||||| |||||||| | ||| ||||||||| | ||||| |||| Sbjct 2074787 GCCCGGCAATGTGCTGATGTGCTGTCTGCTCCCATGGGTGCCGAACCTCGCCGCATTTTA 2074728 Query 14367 CTGCGGCGACGGTGAGCTGTTGCACCATATTCCTGAACAACTGAGCAAACGAGAGAGGTA 14426 ||||| | |||| |||||| |||||||||||| ||| |||||||| || ||||| || || Sbjct 2074727 CTGCGACTACGGCGAGCTGCTGCACCATATTCATGAGCAACTGAGGAACCGAGACAGTTA 2074668 Query 14427 TACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATGGCACGCATC 14486 |||||||||||| | |||| ||||| ||| ||||||| |||| ||| || || | |||| Sbjct 2074667 CACCGACAAATGGGAACGACTCACACTCTCACTCTGGCCTCACAGGGGATTGCGCTCATC 2074608 Query 14487 TGCCTTTACGGGGATTTACAACGATTTGGCCGCCGCATCGACCTTCGTGTAAAAACGGGG 14546 ||||||| | | || ||| | | |||||| | |||||||||||||| ||| ||||| | Sbjct 2074607 TGCCTTTGCTGCGA-TTAAATCAATTTGGTCACCGCATCGACCTTCATGT-GAAACGTGT 2074550 Query 14547 GCCGAAGCTATCCGTGCGCTGGCCACACAGATCCCGGCGT-TTCGTCAGAAACTGAATGA 14605 | |||| || || || || ||||| ||| | ||||| | ||| || |||| ||| || Sbjct 2074549 GATGAAGACATGCGGGCACT-GCCACTCAGCTACCGGCTTATTCATCTGAAAATGAGCGA 2074491 Query 14606 CG 14607 || Sbjct 2074490 CG 2074489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150279370508016