Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_009813.1 Length=48172 Score E Sequences producing significant alignments: (Bits) Value seq24227 152 2e-32 >seq24227 Length=2004 Score = 152 bits (168), Expect = 2e-32 Identities = 447/673 (66%), Gaps = 28/673 (4%) Strand=Plus/Plus Query 46581 ATTTTCGACCCCGTGCTTTGCGAATTGGCTTACAGATGGTTTACTCCTAA-AGAATCTGC 46639 || || ||||| || | || |||||| || | ||||| || || | | || || | Sbjct 357 ATATTTGACCCTGTTTTGTGTGAATTGATGTATAACTGGTTCACCCCGCACAAAAACT-C 415 Query 46640 CAAAATATACGATCCATTCGCCGGTGGTTCTGTTCGGGGTATTGTAGCAAAAGTTCTTGG 46699 ||||| || ||||| || || |||||| ||||| ||| | || | || | || Sbjct 416 TAAAATCTATGATCCGTTTGCTGGTGGTAGCGTTCGTGGTGTAACTGCTTCAATTTTAGG 475 Query 46700 CCATGAATACACTGGAATTGATTTAAGAAAAGAACAAGTAGAAGCTAACCACATT---AA 46756 |||||||| || ||||| ||| | ||||| || ||||| |||||||| ||| || Sbjct 476 GCATGAATATACAGGAATAGATCTTAGAAAGGAGCAAGTTGAAGCTAAT---ATTGAAAA 532 Query 46757 TGCTAAAGAAATCGGATTAGAT---GGCATTAATTGGATTACCGATAATAGCTTAAACGC 46813 |||||| |||| || | | | |||| ||||| | ||| |||| || || | Sbjct 533 TGCTAAGCAAATAGGTGTTCCTAAGGATATTACATGGATCAATGATGATAGTTTGAATGT 592 Query 46814 GGATAAACATATTAAAGATAAC--TCGATGGACTTATTATTTACATGCCCACCTTATTTC 46871 ||| | |||||||||||| | || | || |||||||| || || || || ||| | Sbjct 593 TGATGATTATATTAAAGATAGCAGTCAA--GATTTATTATTGACTTGTCCTCCGTATGCC 650 Query 46872 GACTTAGAGGTATATTCAGATAATAAAGAAGACATTAGCAACATGGAATACGATGAATTT 46931 || | || |||||||| ||| || | || || |||||| | | | ||| ||| Sbjct 651 GATCTTGAAGTATATTCTGATGATCCGCAGGATATATCGAACATGAATGAAGCTGATTTT 710 Query 46932 ATTAAAGTGTATTCCGAGATATTAGATAAG-GGTGCGAATAAATTAAAAGATAATCGGTT 46990 ||| ||| || ||||| || | | ||||| |||||| | ||||||||||| || Sbjct 711 GATAAGACTTATGTTGAAATATT-GAAACGTGGTGCCAATAAAGTCAAAGATAATCGCTT 769 Query 46991 TGCTATTGTGGTTATTTCAGATGT---ACGAGATAAAGCTGGTTTTTATAGAGATTTGAC 47047 |||| | || |||||||| ||||| | | | |||| || |||||| |||||| Sbjct 770 TGCTGTAGTCGTTATTTCTGATGTCAGAAGTAAGAAAGACGGGCATTATAGGGATTTGCA 829 Query 47048 CGGTCTTACT---AAGTCAATTTTTGAGAAGAATGGTATTTACTTCTATAATGA-CTTGA 47103 || || ||| ||| || ||| ||| || ||| || || ||||| || ||| Sbjct 830 GGGACTAACTAAAAAGGCA--TTTAAAGATCAA-GGTTTTATATTTTATAACGATATTGT 886 Query 47104 TTTTGTTAAACTCACTAGGTTCAGGAGCATTAAGAGCTCGCAGAAATATGCGTAACAGGA 47163 || || || | | ||||| || || | | |||||| | || ||| || | | Sbjct 887 GTTAGTCAATGT-TGTTGGTTCGGGGGCCATTCGGGCTCGCCGTAACATGATAAATCGAA 945 Query 47164 AGTTAGTTCGGATACATCAGAATGTTTTAGTGTTTTACAAAGGAAATCCTGATGAGATAC 47223 | ||||| | ||||| |||||||||||||| || |||||| || || | | || Sbjct 946 AAGTAGTTAGATGTCATCAAAATGTTTTAGTGTTCTATAAAGGAGATACTAAGCAAATTA 1005 Query 47224 AAGAACATTTCCC 47236 | ||||| ||||| Sbjct 1006 AGGAACAATTCCC 1018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153960948003168