Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq235 107 2e-18 >seq235 Length=1083483 Score = 107 bits (118), Expect = 2e-18 Identities = 103/132 (78%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137 ||||||||| ||| || || | |||||||||| ||||||||||| || ||||||| Sbjct 693261 ACGGTGTGAGGAACAGCCTCCTCATCTCCCCCATGCCAACGGCCTCCACTGCCCAGATCC 693202 Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCG 95197 | |||||||||||||| |||| |||| |||| |||| | |||| | | |||||||| Sbjct 693201 TGGGCAACAACGAGTCCATCGAGCCCTACACCAGCAACATCTACACCCGCAGGGTGCTCT 693142 Query 95198 CCGGGGAATTCC 95209 | ||||| |||| Sbjct 693141 CGGGGGAGTTCC 693130 Score = 100 bits (110), Expect = 3e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 95105 CCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCT 95164 |||||||||| ||||||||||| || |||||||| |||||||||||||| |||| |||| Sbjct 689346 CCCCCATGCCAACGGCCTCCACTGCCCAGATCCTGGGCAACAACGAGTCCATCGAGCCCT 689287 Query 95165 TCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 |||| |||| | |||| | | |||||||| | || || |||| Sbjct 689286 ACACCAGCAACATCTACACCCGCAGGGTGCTCTCGGGAGAGTTCC 689242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494493796852160