Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_011976.1 Length=43016 Score E Sequences producing significant alignments: (Bits) Value seq818 109 2e-19 >seq818 Length=39844632 Score = 109 bits (120), Expect = 2e-19 Identities = 151/201 (75%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 36799 CAGGCCTGCTGGTAATCGCAGGCCTTT-TTATTTGGTGGAGAGGGAAGACATGAAAAAAC 36857 |||| |||||| ||||| || |||||| ||| |||| |||||||||| ||||| ||| Sbjct 1526880 CAGGGCTGCTGATAATCCCATGCCTTTATTAATTGGGGGAGAGGGAAATCATGATCCAAC 1526939 Query 36858 TAACCTTTGAAATT-CGATCCCCAGCACATCAGCAAAATGCCAT-TCACGCAGTACAGC- 36914 ||||| | || ||| ||||| ||| |||||| | | | || | |||||||||||||| Sbjct 1526940 TAACCGTAGAGATTTCGATCTCCACAACATCAACGACACGCTAAATCACGCAGTACAGCT 1526999 Query 36915 AAATCCTTCCAGACCCAACCAA-ACCAATCGTAGTAACCA-TTCAGGAACGCAACCGCAG 36972 | |||||| | || | || ||| || |||||| ||| || |||| ||| | || |||| Sbjct 1527000 AGATCCTTACTGATCTAATCAACACAGATCGTA-TAAGCATTTCATGAA-GGTACTGCAG 1527057 Query 36973 CTTAGACCAAAATCGGAAGCT 36993 |||| | ||| | |||||| Sbjct 1527058 CTTAAATCAATACACGAAGCT 1527078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137469016148256