Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq28042 89.7 2e-13 >seq28042 Length=8155 Score = 89.7 bits (98), Expect = 2e-13 Identities = 165/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 35998 GTCTACGATGACCTGAAGCAGAAGCTCATCGACCGGGGCATCCCAGAGGCCGAGATCGCC 36057 |||||||| ||| ||| | | || | || || |||||||| | || || | Sbjct 6733 GTCTACGACGACATGAGGGAAAAATTAATACGGCGTGGCATCCCTGCGGAGCAGGTGCGT 6792 Query 36058 TTCATCCACGACGCGAACACCGAGCTTCAGAAAGAAGAGCTGTTCGGCAAGGTCCGCACC 36117 |||||||| || ||||| ||||| |||||| |||||||||||| ||||| | | | Sbjct 6793 TTCATCCATGAAGCGAATACCGACGCACAGAAAAAAGAGCTGTTCGCAAAGGTAAGGAGC 6852 Query 36118 GGCCGCGTCCGCGTCCTGTTCGGCTCCACGGCTAAGATGGGTGCCGGCATGAACGTGCAA 36177 ||| || || || |||| ||||| || |||||||| || || | |||||||| Sbjct 6853 GGCGAGGTGCGTGTATTGTTTGGCTCTACCCAGAAGATGGGCGCAGGTACAAACGTGCAG 6912 Query 36178 AACAGGCTGGTGGCTCTCCACCACCTCGACGCACCATGGCGCCCGTCTGACCTCGAACAG 36237 |||| || | || |||| |||||||| || ||| ||||| | | |||||| Sbjct 6913 GACAGATTGATTGCCATCCATAACCTCGACTGCCCGTGGAAGCCGTCGTGCTTGGAACAG 6972 Query 36238 CG 36239 || Sbjct 6973 CG 6974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194077668197952