Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_019442.1 Length=60523 Score E Sequences producing significant alignments: (Bits) Value seq242 107 7e-19 >seq242 Length=156412533 Score = 107 bits (118), Expect = 7e-19 Identities = 167/232 (72%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 10703 CTTAGCGTTAACTTCCGGTGCCACGCCAGTACAAACTTCAGCCAGCAGGGTGTGGAAGTA 10762 |||||||||| | |||| | ||| || | | ||| ||||| ||||||||||||||||| Sbjct 113593994 CTTAGCGTTAGAT-CCGGAGTCACACCGGCGCTAACGTCAGCAAGCAGGGTGTGGAAGTA 113593936 Query 10763 TGACATTTTTGTATCAGGCCATTTGCTGCCGGAACGTGGCTTTGCTATCACATTGTGAAC 10822 |||| ||| | |||| ||| || | ||||| || ||| || |||||| ||||||| Sbjct 113593935 GGACA-TTTCATGTCAGTCCAGTTCTTTCCGGAGCGGGGCGTTCATATCACGTTGTGAAT 113593877 Query 10823 TTCTGAAGCAGTGATAACA-CCGAGTCTCAGCTTGTGCCATCCATCATCGCCCTGGTCGA 10881 |||||||| |||| ||| |||| | | || ||||| ||||||| | ||| |||| Sbjct 113593876 CTCTGAAGCGTTGATCACATACGAGCCGTAATTTATGCCACGCATCATCCCGCTGTTCGA 113593817 Query 10882 -GGCTGGTAATATCCACGCCAGTTCGCTGGAGAATAATTTCTGGTGTCATGA 10932 ||| || | ||| | | || || | | || || ||||| ||||||| Sbjct 113593816 CAGCT-GTCACATCGATCCTCGTACGTAGCATGATCATGTCTGGAGTCATGA 113593766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193466737440720