Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_019705.1 Length=38759 Score E Sequences producing significant alignments: (Bits) Value seq818 125 2e-24 >seq818 Length=39844632 Score = 125 bits (138), Expect = 2e-24 Identities = 156/203 (77%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 31246 CAGGCCTGCTGGTAATCGCAGGCCTTT-TTATTTGGGGGAGAGGGAAGTCATGAAAAAAC 31304 |||| |||||| ||||| || |||||| ||| ||||||||||||||| |||||| ||| Sbjct 1526880 CAGGGCTGCTGATAATCCCATGCCTTTATTAATTGGGGGAGAGGGAAATCATGATCCAAC 1526939 Query 31305 TAACCTTTGA-AATTCGATCTCCGGCACATCAGCAAAACGCT-ATTCACGCGGTACAGC- 31361 ||||| | || | |||||||||| |||||| | | ||||| | |||||| ||||||| Sbjct 1526940 TAACCGTAGAGATTTCGATCTCCACAACATCAACGACACGCTAAATCACGCAGTACAGCT 1526999 Query 31362 AAATCCTTCCAGACCCAACCAAGCCA-ATCGTAGTGATCA-TTCAGGAGCGCAACCGCAG 31419 | |||||| | || | || ||| || |||||| | | || |||| || | || |||| Sbjct 1527000 AGATCCTTACTGATCTAATCAACACAGATCGTA-TAAGCATTTCATGA-AGGTACTGCAG 1527057 Query 31420 CTTAGACCAAAACAGGAAGCTAT 31442 |||| | ||| ||| |||||||| Sbjct 1527058 CTTAAATCAATACACGAAGCTAT 1527080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123852617019792