Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_019710.1 Length=40710 Score E Sequences producing significant alignments: (Bits) Value seq818 127 5e-25 >seq818 Length=39844632 Score = 127 bits (140), Expect = 5e-25 Identities = 151/193 (78%), Gaps = 9/193 (5%) Strand=Plus/Plus Query 34104 GCTAATAA-CAGGCCTGCTGGTAATCGCAGGCCTTT-TTATTTGGGGGAGAGGGAAGTCA 34161 || ||||| |||| |||||| ||||| || |||||| ||| ||||||||||||||| ||| Sbjct 1526871 GCCAATAAGCAGGGCTGCTGATAATCCCATGCCTTTATTAATTGGGGGAGAGGGAAATCA 1526930 Query 34162 TGAAAAAACTAACCTTTGA-AATTCGATCTCCAGCACATCAGCAAAACGCT-ATTCACGC 34219 ||| |||||||| | || | ||||||||||| |||||| | | ||||| | |||||| Sbjct 1526931 TGATCCAACTAACCGTAGAGATTTCGATCTCCACAACATCAACGACACGCTAAATCACGC 1526990 Query 34220 AGTACGGC-AAATCCTTCCAGACCCAACCAA-ACCAATCGTAGTAACCA-TTCAGGAACG 34276 ||||| || | |||||| | || | || ||| || |||||| ||| || |||| ||| | Sbjct 1526991 AGTACAGCTAGATCCTTACTGATCTAATCAACACAGATCGTA-TAAGCATTTCATGAA-G 1527048 Query 34277 CAACCGCAGCTTA 34289 || |||||||| Sbjct 1527049 GTACTGCAGCTTA 1527061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130093066796544