Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq458 235 2e-57 >seq458 Length=112617285 Score = 235 bits (260), Expect = 2e-57 Identities = 233/296 (79%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 14107 GCCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCGGTGCCGAATCATGCCGCTATTTA 14166 ||| ||| |||||||| |||||||| | ||| ||||||||| | ||||| |||| Sbjct 2074787 GCCCGGCAATGTGCTGATGTGCTGTCTGCTCCCATGGGTGCCGAACCTCGCCGCATTTTA 2074728 Query 14167 CTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAACGAGAGAGGTA 14226 ||||| | |||||||||||||||||||||||| ||| |||||||| || ||||| || || Sbjct 2074727 CTGCGACTACGGCGAGCTGCTGCACCATATTCATGAGCAACTGAGGAACCGAGACAGTTA 2074668 Query 14227 TACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATGGCACGCATC 14286 |||||||||||| | |||| ||||| ||| ||||||| |||| ||| || || | |||| Sbjct 2074667 CACCGACAAATGGGAACGACTCACACTCTCACTCTGGCCTCACAGGGGATTGCGCTCATC 2074608 Query 14287 TGCCTTTACGGGGATTTGCAACGATTTGGCCGCCGCATCGACCTTCGTGTGAAAACGGGG 14346 ||||||| | | || || | | |||||| | |||||||||||||| |||| ||||| | Sbjct 2074607 TGCCTTTGCTGCGA-TTAAATCAATTTGGTCACCGCATCGACCTTCATGTG-AAACGTGT 2074550 Query 14347 GCCGAAGCCATCCGGGCGCTGGCCACACAGCTCCCGG-TGTTTCGTCAGAAACTGA 14401 | |||| ||| ||||| || ||||| ||||| |||| | ||| || |||| ||| Sbjct 2074549 GATGAAGACATGCGGGCACT-GCCACTCAGCTACCGGCTTATTCATCTGAAAATGA 2074495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142247710134144