Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq458 147 6e-31 seq818 134 4e-27 >seq458 Length=112617285 Score = 147 bits (162), Expect = 6e-31 Identities = 163/210 (78%), Gaps = 7/210 (3%) Strand=Plus/Minus Query 31483 ACAACGCATAACCCTGAAAGATTATGCAATGCGCTTTGGGCAAACCAAGACAGCTAAAGA 31542 |||||||| |||||||| || |||||| || |||||| ||| | | | ||| |||| | Sbjct 44870341 ACAACGCAATACCCTGAA-GAAAATGCAAGGCTCTTTGGTCAATCTAGG-CAGTTAAACA 44870284 Query 31543 TCTCGGTGTATATCAAAGCGCGATCAACAAGGCCATTCATGCAGGCCGAAATAttttttt 31602 ||||| |||||| ||||||||| |||| ||||||||||||||||| ||| |||| Sbjct 44870283 -CTCGGGCAATATCACAGCGCGATCTTAAAGGTCATTCATGCAGGCCGAATGATTGTTTT 44870225 Query 31603 AACTATAAACGCTGATGGAAGCGTTTATGCGGAAGAGGTAAAGCCCTTTCCAAGTAACaa 31662 |||||| |||||||| | ||| ||||||||| || |||||| | || || | || | Sbjct 44870224 -ACTATAGGCGCTGATGCAGGCGGTTATGCGGAGGACGTAAAGTCATTCCCGACTA--CA 44870168 Query 31663 aaaaaCAACTGCATAAGTAACACCGCTCTT 31692 | |||| || |||||| |||| |||||||| Sbjct 44870167 ACAAACTACAGCATAA-TAACCCCGCTCTT 44870139 >seq818 Length=39844632 Score = 134 bits (148), Expect = 4e-27 Identities = 164/212 (77%), Gaps = 9/212 (4%) Strand=Plus/Plus Query 34630 GCTAATAA-CAGGCCTGCTGGTAATCGCAGGCCTTT-TTATTTGGGGGAGAGGGAAGTCA 34687 || ||||| |||| |||||| ||||| || |||||| ||| ||||||||||||||| ||| Sbjct 1526871 GCCAATAAGCAGGGCTGCTGATAATCCCATGCCTTTATTAATTGGGGGAGAGGGAAATCA 1526930 Query 34688 TGAAAAAACTAACCTTTGA-AATTCGATCTCCGGCACATCAGCAAAACGCT-ATTCACGC 34745 ||| |||||||| | || | |||||||||| |||||| | | ||||| | |||||| Sbjct 1526931 TGATCCAACTAACCGTAGAGATTTCGATCTCCACAACATCAACGACACGCTAAATCACGC 1526990 Query 34746 GGTACAGC-AAATTCTTCCAGACCCAACCAA-ACCAATCGTAGTAACCA-TTCAGGAACG 34802 ||||||| | || ||| | || | || ||| || |||||| ||| || |||| ||| | Sbjct 1526991 AGTACAGCTAGATCCTTACTGATCTAATCAACACAGATCGTA-TAAGCATTTCATGAA-G 1527048 Query 34803 CAACCGCAGCTTAGACCAAAACAGGAAGCTAT 34834 || |||||||| | ||| ||| |||||||| Sbjct 1527049 GTACTGCAGCTTAAATCAATACACGAAGCTAT 1527080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132517598283360