Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq242 84.2 3e-11 >seq242 Length=156412533 Score = 84.2 bits (92), Expect = 3e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 |||||||||| || | ||| || ||||| |||||||| | || || | |||||||| | Sbjct 42137534 CACCATAAGGCGATCTTGGGTAAAAAGGGGTGGTCTCCTTTTGCGGGATTTCTTGCACTT 42137475 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATA 48164 | ||| |||||||||||||||| ||||| || Sbjct 42137474 TTCCAAAAAGTTCACTGGTGGAGGCTTGGTA 42137444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665185810246720