Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1324 82.4 6e-11 >seq1324 Length=11587733 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || ||||| | |||||||| ||||| || |||| |||||| Sbjct 8091436 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACTCTCGAGGTGGAGCCCAGT 8091495 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | || || ||||| ||||| ||||| | || || || Sbjct 8091496 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCAGACCAG 8091555 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || |||| ||| ||||| ||||||||||||| | || || | || |||||| Sbjct 8091556 CAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAGGATGGGCGCACCCTGTCTGACTACAAC 8091615 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 || || || ||||| || ||||| ||||| Sbjct 8091616 ATCCAGAAGGAATCCACCCTGCACCTGGTG 8091645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412654951216328