Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq242 356 9e-94 >seq242 Length=156412533 Score = 356 bits (394), Expect = 9e-94 Identities = 314/388 (81%), Gaps = 3/388 (1%) Strand=Plus/Minus Query 2115 GGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCACGCCGGAAGT 2174 |||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| Sbjct 113594108 GGTACGCATACTATCATCGCGATAGATGATCGGGGATTCAGTAACATGCACGCCGGAAGT 113594049 Query 2175 AAACTCAAACAGGGCTCTGGCGTCGTTCTCGTACTGTTTTCCCCATGCCAGGGCTTTGGC 2234 || || ||||||| | || |||||||| ||||||| ||| || |||| | || || Sbjct 113594048 GAATTCTAACAGGGTTAAGGAGTCGTTCTAGTACTGTATTCTGCAGCCCAGTGGCTTAGC 113593989 Query 2235 GTTAACTTCCGGGGCCACACCCGTGCAGACCTCAGCCAGCAGGGTGTGGAAGTAGGACAT 2294 ||| | ||||| | |||||| | || || ||||| |||||||||||||||||||||| Sbjct 113593988 GTT-AGATCCGGAGTCACACCGGCGCTAACGTCAGCAAGCAGGGTGTGGAAGTAGGACA- 113593931 Query 2295 TTTCATGTCAGGCCATTTCTTTCCGGAGCGGGGTTTGGCTATCACGTTGTGAACTTCTGA 2354 ||||||||||| ||| ||||||||||||||||| | |||||||||||||| ||||| Sbjct 113593930 TTTCATGTCAGTCCAGTTCTTTCCGGAGCGGGGCGTTCATATCACGTTGTGAATCTCTGA 113593871 Query 2355 AGCTGTGAT-GCCCCCGAGCCGTAATTTTTGCCATGCATAATCTCCCTGCTCGACACCTC 2413 ||| |||| | ||||||||||||| ||||| |||| ||| | ||| |||||| || Sbjct 113593870 AGCGTTGATCACATACGAGCCGTAATTTATGCCACGCATCATCCCGCTGTTCGACAGCTG 113593811 Query 2414 TCACGTCGATCCCGGTACGTTGTAGGATAATTTCTGGTGTCATGCTGCCACCTTCTGCTC 2473 |||| ||||||| |||||| | | ||| || ||||| |||||| |||||| |||||| Sbjct 113593810 TCACATCGATCCTCGTACGTAGCATGATCATGTCTGGAGTCATGATGCCACGATCTGCTA 113593751 Query 2474 CGTGGCTTTCTGTTTCAGGAATCCAAGA 2501 || | || |||||||||||||||||| Sbjct 113593750 TATGCCGTTTTGTTTCAGGAATCCAAGA 113593723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200421347020960