Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1324 132 4e-26 seq1205 114 1e-20 >seq1324 Length=11587733 Score = 132 bits (146), Expect = 4e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| ||| | || |||||||||||||| ||||| Sbjct 8091626 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTACCAGCAAAA 8091567 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||| | | ||||||||| |||||| ||||| | || Sbjct 8091566 ATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACATTT 8091507 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | |||||||| | ||||| || || || |||| |||||||| Sbjct 8091506 TCGATGGTGTCACTGGGCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAGGGTTTTCACG 8091447 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 8091446 AAGATCTGCAT 8091436 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| ||| | || |||||||||||||| ||||| Sbjct 8089231 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCTTCCAGCTGCTTACCAGCAAA 8089172 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | |||| || ||||||||| |||||| ||| | | | Sbjct 8089171 GATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 8089112 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||| | ||||| || || || |||| || ||||| Sbjct 8089111 CTCGATGGTGTCACTGGGCTCCACCTCGAGAGTGATGGTCTTGCCGGTCAGGGTCTTCAC 8089052 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 8089051 AAAGATCTGCAT 8089040 Score = 131 bits (144), Expect = 2e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| |||| | ||| ||| | || ||||||||||| || ||||| Sbjct 8091399 CTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 8091340 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | |||| || |||||||||| |||||| ||||| | | Sbjct 8091339 GATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 8091280 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||| | ||||| || || || |||| || ||||| Sbjct 8091279 TTCAATGGTGTCACTGGGCTCCACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 8091220 Query 35725 AAATATCTGC 35734 ||| |||||| Sbjct 8091219 AAAGATCTGC 8091210 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | || ||| ||| | || ||||||||||| || ||||| Sbjct 8089002 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTGCCAGCAAAG 8088943 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||| | || ||||||||| |||||| ||| | | | Sbjct 8088942 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 8088883 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | |||||||| | ||||| || || || |||| || |||||| Sbjct 8088882 TCAATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCGGTCAGGGTCTTCACA 8088823 Query 35726 AATATCTGCATT 35737 || ||||||||| Sbjct 8088822 AAGATCTGCATT 8088811 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| || ||| ||| | || ||||||||||| || || || Sbjct 8091855 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAA 8091796 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | |||| || ||||||||| |||||| ||||| | | Sbjct 8091795 AATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 8091736 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || || |||| ||||| || || || |||| || ||||| Sbjct 8091735 CTCGATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 8091676 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 8091675 GAAGATCTGCAT 8091664 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || | || ||| ||| | || ||||||||||| || || || Sbjct 8089459 CTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCCTCCAGCTGCTTGCCAGCGAA 8089400 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || ||||||||| | ||| | | ||||||||| |||||| ||||| | Sbjct 8089399 AATCAGCCTCTGCTGGTCAGGAGGGATACCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 8089340 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || || |||| ||||| || || || |||| || || || Sbjct 8089339 CTCGATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 8089280 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 8089279 GAAGATCTGCAT 8089268 Score = 82.4 bits (90), Expect = 7e-11 Identities = 121/168 (72%), Gaps = 4/168 (2%) Strand=Plus/Minus Query 35549 TTTTGAATGTTGTAATCGGCCAAGG--TTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 || || |||||||| |||| |||| | ||| | || |||||||||||||| ||||| | Sbjct 8089897 TTCTGGATGTTGTAGTCGGAAAAGGAGTGCGCCCATCTTCCAGCTGCTTACCAGCAAAGA 8089838 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 || | | ||||| ||| | ||||| || ||||||||| |||||| ||| | | | Sbjct 8089837 TC-AGCTCTGCT-GTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCT 8089780 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCA 35714 | | ||||| || |||||||| | ||||| || || || |||| Sbjct 8089779 CGATGGTGTCACTGAGCTCCACCTCGAGAGTGATGGTCTTGCCGGTCA 8089732 >seq1205 Length=14428146 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| || |||| ||||||||||| || ||||| Sbjct 1810758 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCTTCCAGCTGCTTGCCAGCAAAA 1810699 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||| | || ||||||||| |||||| |||| | Sbjct 1810698 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTC 1810639 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || |||| || |||||| Sbjct 1810638 TCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACA 1810579 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 1810578 AAGATCTGCAT 1810568 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| |||| | ||| ||| | || ||||||||||| || ||||| Sbjct 1810530 TCCTTCTGGATGTTGTAGTCGGAGAGGGTACGCCCATCTTCCAGCTGCTTGCCAGCAAAA 1810471 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||| | || ||||||||| |||||| ||| | | | Sbjct 1810470 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 1810411 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || |||| || || || Sbjct 1810410 TCGATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACG 1810351 Query 35726 AATATCTGCATT 35737 || ||||||||| Sbjct 1810350 AAGATCTGCATT 1810339 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | | ||| ||| | || ||||||||||| || ||||| Sbjct 1810986 TCCTTCTGGATGTTGTAGTCAGAGAGGGTACGCCCATCTTCCAGCTGCTTGCCAGCAAAA 1810927 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | ||| | || |||||||| ||| || ||||| | Sbjct 1810926 ATCAGCCTCTGCTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCCTTCACGTTC 1810867 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || |||| || || ||| Sbjct 1810866 TCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACA 1810807 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 1810806 AAGATCTGCAT 1810796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450584567007680