Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_028660.1 Length=61035 Score E Sequences producing significant alignments: (Bits) Value seq242 107 7e-19 >seq242 Length=156412533 Score = 107 bits (118), Expect = 7e-19 Identities = 167/232 (72%), Gaps = 5/232 (2%) Strand=Plus/Plus Query 23471 TCATGACACCAGAAATTATTCTCCAGCGAACTGGCGTGGATATTACCAGCC-TCGACCAG 23529 ||||||| ||||| || || | | || || | | ||| | || ||| |||| ||| Sbjct 113593766 TCATGACTCCAGACATGATCATGCTACGTACGAGGATCGATGTGAC-AGCTGTCGAACAG 113593824 Query 23530 GGCGATGATGGATGGCACAAGCTGAGACTCGG-TGTTATCACTGCTTCAGAAGTTCACAA 23588 | ||||||| ||||| || | | |||| ||| |||| |||||||| ||||||| Sbjct 113593825 CGGGATGATGCGTGGCATAAATTACGGCTCGTATGTGATCAACGCTTCAGAGATTCACAA 113593884 Query 23589 TGTGATAGCAAAGCCACGTTCCGGCAGCAAATGGCCTGATACAAAAATGTCATACTTCCA 23648 |||||| || ||| || ||||| | || ||| |||| | ||| |||| |||||||| Sbjct 113593885 CGTGATATGAACGCCCCGCTCCGGAAAGAACTGGACTGACATGAAA-TGTCCTACTTCCA 113593943 Query 23649 CACCCTGCTGGCTGAAGTTTGTACTGGCGTGGCACCGGAAGTTAACGCTAAG 23700 ||||||||| ||||| ||| | | || ||| | |||| | |||||||||| Sbjct 113593944 CACCCTGCTTGCTGACGTTAGCGCCGGTGTGACTCCGG-ATCTAACGCTAAG 113593994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195104415700944