Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq818 113 1e-20 >seq818 Length=39844632 Score = 113 bits (124), Expect = 1e-20 Identities = 133/171 (78%), Gaps = 7/171 (4%) Strand=Plus/Plus Query 34284 GCTAATAA-CAGGCCTGCTGGTAATCGCAGGCCTTT-TTATTTGGGGGAGAGGGAAGACA 34341 || ||||| |||| |||||| ||||| || |||||| ||| ||||||||||||||| || Sbjct 1526871 GCCAATAAGCAGGGCTGCTGATAATCCCATGCCTTTATTAATTGGGGGAGAGGGAAATCA 1526930 Query 34342 TGAAAAAACTAACCTTTGA-AATTCGATCTCCAGCACATCAGCAAAATGC-CATTCACGC 34399 ||| |||||||| | || | ||||||||||| |||||| | | | || | |||||| Sbjct 1526931 TGATCCAACTAACCGTAGAGATTTCGATCTCCACAACATCAACGACACGCTAAATCACGC 1526990 Query 34400 AGTACAGC-AAATCCTTCCAGAGCCAACCAA-ACCAATCGTAGTAACCATT 34448 |||||||| | |||||| | || | || ||| || |||||| ||| |||| Sbjct 1526991 AGTACAGCTAGATCCTTACTGATCTAATCAACACAGATCGTA-TAAGCATT 1527040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132101781537600