Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_031019.1 Length=41809 Score E Sequences producing significant alignments: (Bits) Value seq818 118 3e-22 >seq818 Length=39844632 Score = 118 bits (130), Expect = 3e-22 Identities = 153/201 (76%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 2379 CAGGCCTGCTGGTAATCGCAGGCCTTT-TTATTTGGGGGAGAGGGAAGACATGAAAAAAC 2437 |||| |||||| ||||| || |||||| ||| ||||||||||||||| ||||| ||| Sbjct 1526880 CAGGGCTGCTGATAATCCCATGCCTTTATTAATTGGGGGAGAGGGAAATCATGATCCAAC 1526939 Query 2438 TAACCTTTGA-AATTCGATCTCCAGCACATCAGCAAAATGC-CATTCACGCAGTACAGC- 2494 ||||| | || | ||||||||||| |||||| | | | || | |||||||||||||| Sbjct 1526940 TAACCGTAGAGATTTCGATCTCCACAACATCAACGACACGCTAAATCACGCAGTACAGCT 1526999 Query 2495 AAATCCTTCCAGACCCAACCAA-ACCAATCGTAGTAACCA-TTCAGGAACGCAACCGCAG 2552 | |||||| | || | || ||| || |||||| ||| || |||| ||| | || |||| Sbjct 1527000 AGATCCTTACTGATCTAATCAACACAGATCGTA-TAAGCATTTCATGAA-GGTACTGCAG 1527057 Query 2553 CTTAGACCAAAATCGGAAGCT 2573 |||| | ||| | |||||| Sbjct 1527058 CTTAAATCAATACACGAAGCT 1527078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133608317593392