Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Taeniopygia_20guttata_20[refseq_20GCF_5F000151805.1_202013-02-08] 37,096 sequences; 1,232,135,591 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq31314 203 3e-47 seq458 113 5e-20 >seq31314 Length=14737 Score = 203 bits (224), Expect = 3e-47 Identities = 203/264 (77%), Gaps = 16/264 (6%) Strand=Plus/Minus Query 8344 TCTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCG 8403 |||| ||||||||||||||| ||||||||||| | ||||||| |||||||||||||||| Sbjct 1726 TCTCCCTCTGTTGCCCAGGCGGGAGTGCAGTGACGTGATCTCAGCTCACTGCAACCTCCA 1667 Query 8404 CCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAA 8463 | || | ||| || || || || ||||||| ||| | ||| Sbjct 1666 CA-----GGATGAAGTGATCCTACTCCCC----------AGTAGCTAGGACCATAGGTGC 1622 Query 8464 AAGCCACCACGCCAAGCTAATTTTTGTATTTTTA-GTAGAGAGAGGGTTTCACCATGTTG 8522 |||||||| | | | |||||||||||||||| ||||| | |||||||||||| ||| Sbjct 1621 GAGCCACCATGACTACATAATTTTTGTATTTTTTTGTAGAAACAGGGTTTCACCACATTG 1562 Query 8523 GCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTG 8582 ||| |||| ||| ||||||||| ||| ||||||| |||||||| ||||||||||||| Sbjct 1561 CCCAAGCTGTACTCAAACTCCTGAGCTCCAGTGATCCCCCTGCCTCAGCCTCCCAAAGTG 1502 Query 8583 CTGGGATTACAGGCATGAGCCACC 8606 |||||||||| |||||||||||| Sbjct 1501 TTGGGATTACATGCATGAGCCACC 1478 >seq458 Length=112617285 Score = 113 bits (124), Expect = 5e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 23533 TCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTA 23592 ||||| ||||| || | |||||||||||| || | ||| ||||||||||||| ||| || Sbjct 99186506 TCATCTCTACTGATGAGTTCATTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 99186447 Query 23593 ATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCC 23652 | |||||| |||| ||||| || || |||||||| || || || ||||| |||||||| Sbjct 99186446 AGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACAGCTGCAAAGGCT 99186387 Query 23653 AC 23654 || Sbjct 99186386 AC 99186385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521246186014400