Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq45694 127 1e-24 seq6888 86.0 5e-12 >seq45694 Length=23859 Score = 127 bits (140), Expect = 1e-24 Identities = 94/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| |||||| ||||||| || | |||||||||| |||||||||| || ||||||||||| Sbjct 3768 CTTGAGTTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGG 3709 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 ||| |||||||| || ||||||||||| |||| | |||||||||| ||| Sbjct 3708 AATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCTG 3659 >seq6888 Length=22335 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/181 (72%), Gaps = 3/181 (2%) Strand=Plus/Minus Query 102035 TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 || ||||||||||| || ||||||||||| || ||||| || ||||| | ||| || || Sbjct 2092 TTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACCGGTCCCAAATCCCCCTCC 2033 Query 102095 TCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATG 102154 || ||| ||||| | ||||| | || | |||||||| ||||||||||| Sbjct 2032 TCCCTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCATCCCAAATC 1973 Query 102155 TGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACA-ACAG 102213 | ||| || ||| || |||||||| || ||||| || || | ||| |||| |||| Sbjct 1972 TTCACACCCTTTGCAGAGAGCTCTTTAGCGTTTGTAGAACC-CT-ACAAAACACAGACAG 1915 Query 102214 T 102214 | Sbjct 1914 T 1914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360988853395337