Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq5663 163 3e-35 seq43270 113 5e-20 >seq5663 Length=3775 Score = 163 bits (180), Expect = 3e-35 Identities = 204/280 (73%), Gaps = 0/280 (0%) Strand=Plus/Plus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | |||||||||||||||||||| | |||||||||||| Sbjct 3425 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 3484 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 || || |||||| ||| ||| |||| | ||| |||| | ||||||| || Sbjct 3485 GACCGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGCGG 3544 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTC 83298 ||||| |||||| ||||||| |||||| || || || | ||||| ||||| Sbjct 3545 GAAGGGCAGCGCCTCTTTCAGGAAGGTGAAGAGGGGGTGCGCGTTCTTCCCGTTCACCTC 3604 Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358 |||||||||||| | || || || |||| | | || || |||||||| ||||||| ||| Sbjct 3605 GCACTTCTCGAACATGATGAAATTGGGCTTGTACCCCTTGCCAGGACGAACGTGCTCCAG 3664 Query 83359 GGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGA 83398 || ||| |||||| | ||| ||||||||||||| || Sbjct 3665 CGAGAGCAGGATCTCCTCGTTCGTGGCGTTTTCCTGGGGA 3704 >seq43270 Length=3094 Score = 113 bits (124), Expect = 5e-20 Identities = 120/156 (77%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447 || |||||| || || ||||| || ||||| || ||||| |||||| ||| | || Sbjct 736 TTACCTGGTAGCCAAATTGGTTGCAGGGGAAGCCCAGCACGCCCAGCCGCCGGGGG--TA 679 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 | | | ||||||| ||| | ||| ||||| ||||| |||||| | ||||||||||||| Sbjct 678 GCGGGCT-TGCAGCTGGTTGAGCTGGGTGTAGTCCCGCACCGTGGTGCCTCAGAGGGACG 620 Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGA 83543 | |||||||||||||| | || |||||||| |||| Sbjct 619 CCACGTTCTCGATGAGGACCACGCGGCCCCGGAAGA 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608343345313480