Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq6888 95.1 8e-15 >seq6888 Length=22335 Score = 95.1 bits (104), Expect = 8e-15 Identities = 114/153 (75%), Gaps = 9/153 (6%) Strand=Plus/Minus Query 97396 CCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 ||||| |||||||||||||| |||||||| ||||| |||||||| ||||| | || || Sbjct 2094 CCTTG-TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACCGGTCCCAAATCCCCC 2036 Query 97456 TCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATC 97511 || || || | |||||| ||||||| |||| || |||||||| ||||| Sbjct 2035 TCCTCCCTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGCGATCCATTAGCATC 1980 Query 97512 CCAAATGTGCACACCAGATGCTGCAAGCTCTTT 97544 |||||| | |||||| ||| | |||||||| Sbjct 1979 CCAAATCTTCACACCCTTTGCAGAGAGCTCTTT 1947 Score = 86.0 bits (94), Expect = 4e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 5445 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 5386 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 ||||||||||| | || || ||||| | || || || | | |||| ||||| Sbjct 5385 AGTCCCATATCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGAACATAG 5326 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||||| | | |||| || || ||||| ||||| Sbjct 5325 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 5291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346532159715590