Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq13820 203 2e-47 >seq13820 Length=14146 Score = 203 bits (224), Expect = 2e-47 Identities = 429/632 (68%), Gaps = 25/632 (4%) Strand=Plus/Plus Query 107994 AATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAG 108053 || |||||||| ||||| |||||||| |||||||| || ||||| ||| ||||| ||| Sbjct 529 AACACATGCGGCACAGATTTCCCCATCAAGACCAACGCGGAGATCATCCGTGCCCTGAAG 588 Query 108054 ATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGC 108113 || || |||| ||||||| |||||||| ||| || || | ||| | | ||| Sbjct 589 GTGCTGCAGGGGCAGAACAGCATGGAGTCAGAGAAGCCCTCGGCCCTCAAGCAGGAGCGC 648 Query 108114 TGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCA-AGATGAAGGACCC 108172 ||| |||| | | | ||| | | | || || || ||| |||| || Sbjct 649 TGGCGGTACCACCACAAAGTGGGGAAGTTCATCTCCCGGACAGCCACAGA-GAAGCTGCC 707 Query 108173 TCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTT 108232 || || | || | ||||||||||| || | || || | |||| | | || ||||| Sbjct 708 GCCACCCCACAACTCCCCCATGTTCACGGGCAGCGCATACATCGTGGTCACACGGGCCTT 767 Query 108233 TGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACAC 108292 || || || |||| || ||||| | | || | |||| |||| ||| ||||| Sbjct 768 CGTGCAGCACATCTTCGAGAACCCCACGGCGCAGCAGTTCCTTGAGTGGGCCAAGGACAC 827 Query 108293 CTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCG--TGCTCCGTGGATGCCTGGC 108350 ||| ||||| ||||| ||| ||||||||||||| | || ||| | | | |||| ||| Sbjct 828 CTACAGCCCTGACGAGCACGTCTGGGCCACCCTCAACCGCATGCCCGGCG--TGCCAGGC 885 Query 108351 TCTGTTCCTAGCCA--CCCCA-AGTATCACATCTCAGACATGACTGCCATCGCCAGGCTC 108407 |||| ||||| ||| || | ||| || ||||| |||| || Sbjct 886 ----------GCCATGCCCCAGAGTGACAAGT-TCAAACCGCCCTGCCC-CGCCTGG--- 930 Query 108408 GTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCT 108467 |||||||||||||| ||||| || ||||| ||| ||||| || |||||||| | Sbjct 931 -TCAAGTGGCAGTACATGGAGGGCGACACCAGCAAGGGCGCGCCATACCCACCCTGCACC 989 Query 108468 GGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAG 108527 || || | | | || ||||||| ||||||| || ||| || |||||| |||||| Sbjct 990 GGCCGGCACCAGCGCTCCGTCTGCATCTACGGGGTGGGCGACGTGCCCTGGATGCTCCAG 1049 Query 108528 AACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGC 108587 | || ||||||||||| |||||||| ||||| | ||||| ||| || | | |||||| Sbjct 1050 CAGCACCACCTCTTGGCCAACAAGTTCGACCCCCGAGTGGACGATGCCGCCATCCAGTGC 1109 Query 108588 TTAGAAGAGTACCTACGTCATAAGGCCATCTA 108619 | || ||| |||| || || | |||| |||| Sbjct 1110 CTGGAGGAGCACCTGCGCCACATGGCCCTCTA 1141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348015881429238