Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq39065 143 4e-29 seq6541 116 5e-21 >seq39065 Length=63633 Score = 143 bits (158), Expect = 4e-29 Identities = 210/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 8679 GGAACGCGGCCAACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAGTTGCAC 8738 |||| || | || ||||| ||||| |||||| | |||| || ||| | | ||| Sbjct 7039 GGAAGGCAGTGAAAGGACAGCCTTTCACGTTGTTGCAGATGAGCTTCTGTAAGGAGGCAG 6980 Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798 | |||| || | || ||||| | ||| || |||||||| || |||||||| | |||| Sbjct 6979 TGTTGATTATTTCGAAGCCCACTTTTCCACCAAAGGTGCTCGGCTTCCAGTACTCAGGGG 6920 Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858 |||||||| | || |||| || ||||| || || ||||| || || | ||| | || Sbjct 6919 AGCAGATGGCATTTCCCATCAGTCCTTTCAGAGAGAACGGTGCTCCTATCTCCACCATCG 6860 Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918 |||| || |||||||| || || || |||||||| | || || | |||| ||||| Sbjct 6859 TCTCGCCAAAGATGGCACCTGGCCGTGGTTTTTCCACGAGGAGGCCTGGATACAGCTCCA 6800 Query 8919 CAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCTG 8975 || || || ||||| ||||| | ||||| || || ||||| |||||||||| Sbjct 6799 TCGCATCAATATCTCCATAAAGCTCTTCCAGTTCAGCCGCCATTTCTTTTTCTCCTG 6743 Score = 131 bits (144), Expect = 2e-25 Identities = 174/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 9622 ATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGA 9681 ||||||| ||| || || ||||| || |||||| ||| || || || || ||||||| Sbjct 4243 ATGAGTCTAGTAGTTTGGAACAGCTGCTCGTCATCCCACTCCGGGTGCTCCTGTTTCAGG 4184 Query 9682 ACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGC 9741 | ||||| || | |||||||||||| ||||| || |||||||||||||| | || || Sbjct 4183 ATGTCGCAGACCCGGTTGTGTTCCCTCAGCCATATCGTAGCGTACATCATCAAGCCCGGG 4124 Query 9742 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGA 9801 |||| || || |||| || || || | | ||| | ||| ||||| | ||||| Sbjct 4123 ACCAAACCGAACACCTCCTGCCCCACGGAAAACTGCAAGTGTTCAGGCACATGAGGAGGG 4064 Query 9802 TAGATCATGTGCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAATAATC 9861 |||||||| | |||| || || || | || ||||||||||| || |||| ||| Sbjct 4063 TAGATCATCTCTGCCTGAGTGTCCTTCACAGTTGGTGGATACATTTCTCCACCAATCATC 4004 Query 9862 TG 9863 || Sbjct 4003 TG 4002 >seq6541 Length=23092 Score = 116 bits (128), Expect = 5e-21 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798 |||| || ||| |||| || |||| |||||||| |||||||||||||| | |||| Sbjct 12957 TCTTAACTATCTCAAAGCCAGTTGCTCCACCGAAGGTACTGGGTTTCCAGTACTCTGGGG 13016 Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858 |||||||| ||| ||| || ||||| |||||||| ||||| || | ||| | |||| Sbjct 13017 AGCAGATGGGGTTTCCCAGAAGCCCTTTCAGGGAAAATGGAGCTCCAATCTCCACCATGC 13076 Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918 | || || || || | ||||| |||| || || | || || || || ||||||| Sbjct 13077 TTTCTCCAAAAATACCATTGGGTTGGGGTTTCTCAAGCAGCAAGCCCAGATAAAACTCCA 13136 Query 8919 CAGCCTCGATGTCTCCGTAAAG 8940 ||| || |||||||| || || Sbjct 13137 GAGCATCAATGTCTCCATACAG 13158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 707997064159280