Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq46105 95.1 2e-14 seq18114 91.5 3e-13 seq14777 91.5 3e-13 seq24070 84.2 4e-11 >seq46105 Length=67290 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| Sbjct 63729 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 63788 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 63789 TCCCGGCAGAGA 63800 >seq18114 Length=23736 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 7944 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8003 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 8004 CCCCACGTTGGGC 8016 >seq14777 Length=15795 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 123 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 182 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 183 CCCCACGTTGGGC 195 >seq24070 Length=7284 Score = 84.2 bits (92), Expect = 4e-11 Identities = 65/75 (87%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCT-AGTGGTCGTGGGTTCGA 142561 ||||||| || ||||||||||||||| ||||||||||||| ||| || |||||||||| Sbjct 5642 AGCCCGGCTACCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGT-GTTGTGGGTTCGA 5700 Query 142562 GCCCCACATCGGGCA 142576 ||||||| | ||||| Sbjct 5701 GCCCCACGTTGGGCA 5715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027052089322667