Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq45112 100 1e-15 seq1096 96.9 1e-14 >seq45112 Length=29911 Score = 100 bits (110), Expect = 1e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || ||| |||| ||| | ||||| || || ||||||||||| | || || || || || Sbjct 28582 GTCACTAATGCTGTAGTGACTGTGCCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 28523 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | ||||| || |||||||| ||||| || ||||| Sbjct 28522 AAAGATGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCAACAGCT 28463 Query 451433 GCTGCTCTAGCATATGGACT 451452 ||||| |||| ||||| || Sbjct 28462 GCTGCGATAGCTTATGGTCT 28443 Score = 100 bits (110), Expect = 1e-15 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || ||| |||| ||| | ||||| || || ||||||||||| | || || || || || Sbjct 28782 GTCACTAATGCTGTAGTGACTGTGCCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 28723 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | ||||| || |||||||| ||||| || ||||| Sbjct 28722 AAAGATGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCAACAGCT 28663 Query 451433 GCTGCTCTAGCATATGGACT 451452 ||||| |||| ||||| || Sbjct 28662 GCTGCGATAGCTTATGGTCT 28643 >seq1096 Length=2382 Score = 96.9 bits (106), Expect = 1e-14 Identities = 275/419 (66%), Gaps = 9/419 (2%) Strand=Plus/Plus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || |||||| | | || || | || || ||||| | || || ||| || || || Sbjct 339 GGCAAGCCCAAGGTGCAGGTGGAGTACAAGGGTGAGATGAAGACCTTTTTCCCAGAGGAG 398 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || ||||| ||||| || ||||| || | || || ||| | || | | | Sbjct 399 ATCAGCTCCATGGTCCTTACCAAGATGAAGGAGATTGCTGAGGCTTATCTGGGG-CGCAA 457 Query 451313 GTTACTGAT-GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 | | | || || || || || || || ||||| |||||||| | || || || || || Sbjct 458 GGTGCAGAACGCTGTCATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCAC 517 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 |||||||| || || |||| | ||||| | || ||||| || || || ||||| Sbjct 518 CAAAGATGCTGGCACCATCACTGGCCTTAATGTGATGCGTATTATCAACGAGCCCACAGC 577 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA-----ACAGAAGaaaaaaaTATT 451486 ||||||| |||| ||||| | || || ||||| | | | ||| || ||| | Sbjct 578 AGCTGCTATAGCCTATGGCTTTGGCAA--GAAAAGGACCCGGGCTGGAGAGAAGAATGTG 635 Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG 451546 | | ||||| || || || || ||| |||| ||| | ||| | ||||| ||||| Sbjct 636 CTCATCTTTGACTTGGGAGGGGGCACTTTTGATGTGTCTATCCTTACCATTGAGGATGGT 695 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 | ||||| || ||| | || ||| || || ||||| || || || || |||| || Sbjct 696 ATCTTTGAGGTGAAGTCCACAGCTGGGGACACCCATCTGGGTGGGGAGGACTTTGACAA 754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974210021117396