Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1096 307 1e-78 seq45112 179 5e-40 seq26634 93.3 5e-14 >seq1096 Length=2382 Score = 307 bits (340), Expect = 1e-78 Identities = 1044/1603 (65%), Gaps = 44/1603 (3%) Strand=Plus/Minus Query 6568 TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGA 6627 |||||| || |||| || || ||||| ||||| ||||| |||||||| || || | Sbjct 1640 TTCATCCTCTGCTTTGTATTTCTCCGCTTCTTGCACCATACGGTCAATGTCATCCTT-GC 1582 Query 6628 TAAT-CTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 ||| | ||||| ||||| || || || ||||| | ||||||| | ||| ||| Sbjct 1581 TAAGGCGACCCTTGTCATTGGTGATGGTGATCTTGTTCTCCTTACCCGTGCTCTTGTCTA 1522 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 |||| || || |||| |||||||| ||||| | ||||| | || | ||| || || Sbjct 1521 CAGCGCTGACGTTCAGGATACCATTGGCATCGATGTCGAAAGTGACCTCAATCTGGGGGA 1462 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 || | || || | || || ||||||| || || | || || || |||| || Sbjct 1461 CTCCGCGGGGAGCCGGGGGGATGCCCGTTAGGTCGAACTTGCCCAGCAAGTTGTTGTCTT 1402 Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGT-TGATTATCTTGT 6865 ||| | | | ||||| ||||| || | | || || | | || || ||| Sbjct 1401 TCGTCATGGCCCTCTCACCCTCATACACCTGGACCAGGAC-GCTGCTCTGGTTGTCTGAG 1343 Query 6866 GCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGG 6925 || | ||| | || || || | ||||| || || || | | || | | Sbjct 1342 TAGGTGGTGAATGTCTGAGTTTGTTTGGTGGGAATGGTGGTGTTGCGCTTGATGAGAGCA 1283 Query 6926 GTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAAC 6985 ||||| | ||||| || |||| || || |||||||| || || ||||| || | | Sbjct 1282 GTCATCACTCCACCGGCTGTCTCGATGCCCAGGGACAGAGGGGTGACATCCAACAGCAGC 1223 Query 6986 AGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 || || || ||| || | || ||| | | ||| || ||||| || | || || Sbjct 1222 AGATCCTGCACATTCTCAGACTTGTCTCCCATGAGGATAGCTGCTTGCACAGCAGCACCA 1163 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||||||||| || | || || || ||||| || || || | ||| Sbjct 1162 TAAGCAACAGCCTCATCGGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTCC 1103 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || || | ||| || || ||||| || || || ||||| |||| ||||| || | Sbjct 1102 TGTAGCAGCTTTTGGATCTTGGGGATACGGGTAGAGCCACCCACCAGCACGATCTCCTGG 1043 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 | | || || | ||| | || || || | || || || || |||| | Sbjct 1042 ATCTGGCCCTTGTCTAGCTTGGCATCACGCAGAGCCTTCTCCACGGGCTCCAGGGTGCCA 983 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||| | || | || ||||| || || ||||| |||||||| || ||||| ||| Sbjct 982 CGGAAGAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGTAATGGAGGTGTAGAAGTCA 923 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGAT---AACGTT 7342 | ||| ||||| | || ||||| |||||| | | ||||| | ||||| | || Sbjct 922 ATGCCCTCGTAGAGGGAGTCAATCTCAATGCTAGCTTGTG---TGGAAGAGCTGAGGGTG 866 Query 7343 CGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATA 7402 ||||| || | |||||| ||||| || | || | | || ||| ||| || | ||| Sbjct 865 CGCTTCGCCCTCTCACAAGCCGTACGCAGTCGCCTCACCGCTCGCTTGTTGCCAGCAATG 806 Query 7403 TCTTTCTTATGTTTACGTTTAAACTCTTC-AGAGAAGTGTCGA--AGGAGTCTCGAATCG 7459 || ||| || ||||| || || ||||| | | || || | | | | | || Sbjct 805 TCACGCTTGTGCTTACGCTTGAATTCTTCCACAAAATGGTTCACCATGCGGTTG---TCA 749 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || || || ||||||| || || ||||| || || | || || ||||||||||| | Sbjct 748 AAGTCCTCCCCACCCAGATGGGTGTCCCCAGCTGTGGACTTCACCTCAAAGATACCATCC 689 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 |||||| | | | || |||||||| || || || |||| |||||| ||||| || ||| Sbjct 688 TCAATGGTAAGGATAGACACATCAAAAGTGCCCCCTCCCAAGTCAAAGATGAGCACATTC 629 Query 7580 GTATCGTC-------GTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGG 7632 | || | ||| || ||||| | | || || || ||||| || || || || Sbjct 628 TTCTCTCCAGCCCGGGTCCTT-TTCTTGCCAAAGCCATAGGCTATAGCAGCTGCTGTGGG 570 Query 7633 TTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTT 7691 || || |||||||| | ||| || ||||||| || || | |||||||| || || | Sbjct 569 CTCGTTGATAATACGCATCACA-TTAAGGCCAGTGATGGTGCCAGCATCTTTGGTGGCCT 511 Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTAC 7751 | || || || || || ||||| || || || || | ||| |||| | || || | Sbjct 510 GGCGCTGGGAGTCATTGAAGTAAGCAGGCACTGTGATGACAGCGTTCTGCACCTTGCGCC 451 Query 7752 CGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 | ||||| | || || || || ||||| |||||||| ||||| || ||||| || | Sbjct 450 CCAGATAAGCCTCAGCAATCTCCTTCATCTTGGTAAGGACCATGGAGCTGATCTCCTCTG 391 Query 7812 CCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCA 7870 | ||| || ||| | ||||| || | || || | | | |||| || || || Sbjct 390 -GGAAAAAGGTCTTCATCTCACCCTTGTACTCCACCTGCACCTTGGGCTT----GC--CA 338 Query 7871 CCGGGGATAACCTTA---TACGACCAATCTTTCATATCGTCTTGGACCTGTTGG-TCCGA 7926 || | | ||| | | | ||| | ||||| || || ||| || || || Sbjct 337 CCCTCGTTCACCACACGGAAGGGCCAGTGCTTCATGTCAGACTGCACC-GTGGGATCATC 279 Query 7927 AAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGT 7986 | |||| | ||||| |||||||| ||||| || | ||||| | |||||||| || Sbjct 278 ATACTTGCGGCCGATGAGACGCTTGGCATCGAAGATGGTGTTGGTAGGGTTCATAGCCAC 219 Query 7987 TTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGA 8046 || ||||| || ||||| ||||| || || || || || || || || || || | Sbjct 218 CTGATTCTTGGCAGCGTCACCGATGAGGCGCTCGGTA---TCAGTGAAGGCCACATA-GC 163 Query 8047 TGGG-GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGA 8105 |||| || || || || || |||||||| || || || || || | | | || ||| Sbjct 162 TGGGCGTGGTGCGGTTGCCCTGGTCGTTGGCGATGATCTCCACTTTGCCATGCTGGAAGA 103 Query 8106 CGCCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 | || ||||| || ||||| || || || || || ||||| || Sbjct 102 CACCCACGCAGGAGTACGTCGTGCCCAAGTCGATGCCGATCGC 60 >seq45112 Length=29911 Score = 179 bits (198), Expect = 5e-40 Identities = 365/540 (68%), Gaps = 9/540 (2%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || ||||| ||||| || || || Sbjct 27790 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 27849 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || | ||||| || ||||| || || || ||||| |||| ||||| Sbjct 27850 AAATCCTGCAGCAGCTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGATG 27909 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | ||| || || | || | || || || | ||||| ||||| |||| Sbjct 27910 TCATGGATCTGCGACTTGTCTAGTTTGGCATCCCGCAGCGCCTTTTCCACAGGATCCAGG 27969 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| ||| || ||||| || || | |||||||||||| ||| Sbjct 27970 GTGCCACGGAACAGGTCAGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTGTAG 28029 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | |||||||||||||| | | || | |||| || | Sbjct 28030 AAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGCGTGCTCGACGACAGG 28089 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||||||||| |||||||| || | || |||| | || || | | Sbjct 28090 GTACGCTTTGCGCGCTCGCACGCCGTGCGCAGGCGGCGAACCG-ACTCG-----CTG--- 28140 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCG 7459 || |||||||| || || || || || || || |||||| | | | || Sbjct 28141 ATGTCTTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTCACCATGCGGTTGTCA 28200 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 || ||||| ||||||||||| || || || || || | || || |||||||| || || Sbjct 28201 AAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGACTTCACCTCAAAGATGCCATCT 28260 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | | || |||||||| || ||||| || |||||||| || || || ||| Sbjct 28261 TCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAGATAAGAACATTC 28320 Score = 82.4 bits (90), Expect = 1e-10 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 ||||| ||||| || || || ||||| | || || | | |||||| ||||| Sbjct 26740 CCCTTGTCATTTGTTATTGTGATCTTGTTCTCCTTGCCAGTGCTCTTATCCACAGCAGAC 26799 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 ||||| | || ||||| ||||||| ||| || | || | |||||| ||| ||| || Sbjct 26800 ACATTGAGGATGCCATTGGCATCAATATCAAAGGTGACTTCAATTTGAGGTACACCTCTG 26859 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 || || | |||||||| || | ||||| | || || || |||| ||| | | | | Sbjct 26860 GGAGCAGGGGGAATACCAGTCAGCTCAAACTTGCCCAGCAAGTTGTTGTCCTTTGTCATG 26919 Query 6815 TTACGTTCACCTTCATAGAC 6834 |||||| ||||||||||| Sbjct 26920 GCACGTTCTCCTTCATAGAC 26939 >seq26634 Length=6494 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/181 (72%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT---TGGTTC 7993 ||||| || ||||| |||||||| || ||||| | |||||| || || |||||| Sbjct 6301 CCGATGAGCCGCTTGGCATCAAACACGGTGTTCTCGGGGTT---GGACGTGAGCTGGTTC 6357 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || ||||||||||| || || || | ||| ||||| ||||| || || || Sbjct 6358 TTGGCGGCGTCCCCGATCAGGCGCTCCCCCTCGGGCGTGAACGCCACGTAGGACGGCGTG 6417 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 | ||||| || |||||||| || || ||||| || ||| |||| | | ||||| ||| Sbjct 6418 ATGCGATTGCCCTGGTCGTTGGCGATGATTTCCACCCGGCCGTTCTTGAAAACGCCCACG 6477 Query 8114 C 8114 | Sbjct 6478 C 6478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634659729273080