Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq14659 100 3e-16 seq10907 89.7 6e-13 seq27434 86.0 7e-12 >seq14659 Length=34158 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| || |||||||| | ||||||||||||| ||| | || || ||||| Sbjct 10305 CTCATCTTTGCTGGTGTACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCC 10246 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 ||| |||| || || ||||| ||||||| | || |||||||||||||| ||||| || Sbjct 10245 CAAGTTCTGCTGATTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTACGGCGTGCC 10186 Query 106612 CGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||||||||| || | || || || | ||| Sbjct 10185 GGTCTCCGTCTGAGATTCGATGATCGCGTACCA 10153 >seq10907 Length=223548 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 ||| || || |||||||||||||||||||||||||| || || || ||||||||||| Sbjct 4756 ATATTCACCTACTCGCTTCTCAAAGAAGTTGGTCTTGCCTTCCAGAGAGATGTTTTCCAT 4697 Query 117045 AAAGTCAAATGGATTCTTCGCGTT 117068 |||||||| ||||||| ||| || Sbjct 4696 GAAGTCAAAAGGATTCTCCGCTTT 4673 >seq27434 Length=30354 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||||| | |||||||||||| ||||| || || ||||| || |||| ||||| Sbjct 19180 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTCTTCT 19239 Query 117353 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 ||| |||| | ||||| ||| || || || || |||||||| || || || |||||| Sbjct 19240 TCAGCCAAAATATAGCAGCA-AAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAC 19298 Query 117412 GCAA 117415 |||| Sbjct 19299 GCAA 19302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589541360175880