Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq45112 122 7e-22 >seq45112 Length=29911 Score = 122 bits (134), Expect = 7e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| ||| | ||||| ||||| ||||| |||||||| || ||||| ||||| ||||||| Sbjct 28575 ATGCTGTAGTGACTGTGCCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACAAAAGATG 28516 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| ||||| || || ||||| || || ||||||||||| || || |||||||| Sbjct 28515 CTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCAACAGCTGCTGCGA 28456 Query 550518 TTGCATATGGACTTGATAAA 550537 | || ||||| || || ||| Sbjct 28455 TAGCTTATGGTCTGGACAAA 28436 Score = 122 bits (134), Expect = 7e-22 Identities = 111/140 (79%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| ||| | ||||| ||||| ||||| |||||||| || ||||| ||||| ||||||| Sbjct 28775 ATGCTGTAGTGACTGTGCCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACAAAAGATG 28716 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| ||||| || || ||||| || || ||||||||||| || || |||||||| Sbjct 28715 CTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCAACAGCTGCTGCGA 28656 Query 550518 TTGCATATGGACTTGATAAA 550537 | || ||||| || || ||| Sbjct 28655 TAGCTTATGGTCTGGACAAA 28636 Score = 86.0 bits (94), Expect = 5e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 |||||||| |||||||| | || ||||| ||||||||||| || || ||||| |||||| Sbjct 26876 GGTATTCCCCCTGCTCCCAGAGGTGTACCTCAAATTGAAGTCACCTTTGATATTGATGCC 26817 Query 552567 AATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 ||||| || | |||||| ||||| ||||| Sbjct 26816 AATGGCATCCTCAATGTGTCTGCTGTGGATAA 26785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4026144770702630