Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq6888 132 4e-26 seq45694 87.8 1e-12 >seq6888 Length=22335 Score = 132 bits (146), Expect = 4e-26 Identities = 143/184 (78%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||||||| |||| |||||||| || |||||||||||||| || || |||||||||| || Sbjct 2099 CATGTCCTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACCGGTCCCAAATC 2040 Query 30210 TCCCTCTTCCCTG-TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268 ||||| |||||| |||| ||| ||| ||| |||| || || | || || || || | Sbjct 2039 CCCCTCCTCCCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCAT 1981 Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30328 |||| ||||| || ||||| | ||||||||||| | |||||| || || || || || | Sbjct 1980 CCCAAATCTTCACACCCTTTGCAGAGAGCTCTTTAGCGTTTGTAGAACC-CT-ACAAAAC 1923 Query 30329 ACAG 30332 |||| Sbjct 1922 ACAG 1919 >seq45694 Length=23859 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161 || || ||||||||||| |||| || || |||||| | | ||| | |||||| || || Sbjct 3767 TTGAGTTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 3708 Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 ||||||||||| || ||| |||||||||||| | ||||| || ||| Sbjct 3707 ATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 3660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408320855131151