Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq44153 109 4e-19 seq31408 107 2e-18 >seq44153 Length=51076 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| ||||| || || || ||||| |||| | || | |||| |||| || Sbjct 693 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTG 634 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| | ||| ||||| || ||||||||||| || || || || || Sbjct 633 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 574 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| | ||||||||||| |||| || ||||| || Sbjct 573 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGTCTTGCCAGT 514 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 513 CAGGGTCTTCACAAAGATCTGCATG 489 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| ||||| || || || ||||| || | | || | |||| |||| || Sbjct 465 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTG 406 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| | ||| |||||||| ||||||||||| || || || || || Sbjct 405 CTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 346 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 345 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGT 286 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 285 CAGGGTCTTCACAAAAATCTGCATG 261 >seq31408 Length=4037 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| | || | || | |||||| ||||| || || || || ||||| || | Sbjct 3631 CCACCTCTCAGGCGCAGCACAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGAC 3690 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| |||| ||||| || ||||| |||| | ||| |||||||| ||| Sbjct 3691 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 3750 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || ||| | || | |||||| | |||||| Sbjct 3751 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACT 3810 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||| || ||||| || | || || ||||| |||||||| Sbjct 3811 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 3857 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 || ||||| |||||||| || || ||||| || | | || | |||| |||| ||| Sbjct 2971 TGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGC 3030 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| ||||| || ||||||||||| || || || || || Sbjct 3031 TTGCCAGCAAAGATGAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 3090 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | |||||| | || || || || |||| || || || || Sbjct 3091 GCCTTGACATTCTCAATGGTGTCACTAGGCTCGACCTCCAGGGTGATGGTCTTCCCTGTC 3150 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 3151 AGGGTCTTCACAAAGATCTGCATG 3174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395990616062559