Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq10907 89.7 6e-13 seq14659 87.8 2e-12 seq27434 86.0 7e-12 >seq10907 Length=223548 Score = 89.7 bits (98), Expect = 6e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493 || ||| ||||||| |||||||| ||||||||||| || || || |||||||||||| Sbjct 4673 AAAGCGGAGAATCCTTTTGACTTCATGGAAAACATCTCTCTGGAAGGCAAGACCAACTTC 4732 Query 65494 TTTGAGAAGCGAGTTGGGGACTAT 65517 |||||||||||||| || || ||| Sbjct 4733 TTTGAGAAGCGAGTAGGTGAATAT 4756 >seq14659 Length=34158 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || || || |||| ||||||||||| || || || || ||||| ||||| || Sbjct 10153 TGGTACGCGATCATCGAATCTCAGACGGAGACCGGCACGCCGTACATGCTCTACAAAGAC 10212 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 | || |||| |||||| || || |||| ||||| || ||||| || ||||| || Sbjct 10213 TCCTGCAACAGGAAGAGCAATCAGCAGAACTTGGGGACCATCAAATGCAGCAATCTGTGT 10272 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAG 76030 || ||||| | |||||||| || |||||| Sbjct 10273 ACAGAAATAGTGGAGTACACCAGCAAAGATGAG 10305 >seq27434 Length=30354 Score = 86.0 bits (94), Expect = 7e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 65087 TTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGG 65145 |||||||||| || || || |||||||| || || || || ||| ||||| | |||| Sbjct 19302 TTGCGTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTT-TGCTGCTATATTTTGG 19244 Query 65146 TTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGAT 65205 |||||||| |||| || ||||| || || ||||| |||||||||||| | ||||| Sbjct 19243 CTGAAGAAGAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTTATTAGCAGAGAT 19184 Query 65206 GAGG 65209 |||| Sbjct 19183 GAGG 19180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596125252590560