Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq31408 91.5 3e-13 seq10907 87.8 4e-12 >seq31408 Length=4037 Score = 91.5 bits (100), Expect = 3e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| || || | || | ||| | ||||| ||| || ||| || || ||| Sbjct 3628 ATGCCACCTCTCAGGCGCAGCACAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCA 3687 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||| || || ||||||||||| | ||||| ||||| || Sbjct 3688 GACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGG 3747 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || || || || || || ||||| || | || | || Sbjct 3748 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCC 3807 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| || || ||||| || ||||| | || || | ||| ||||||||||| Sbjct 3808 ACTTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATTTT 3860 >seq10907 Length=223548 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905 |||| || ||| || | ||| ||| |||||| | ||| |||||||||||||| || | Sbjct 3482 CCTCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 3423 Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965 | |||||||| |||||||||||| | ||||||||| || || || || ||||| | Sbjct 3422 TCAGCCAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 3363 Query 49966 CTATTA 49971 ||| || Sbjct 3362 CTACTA 3357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 983728390437450