Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq13622 179 5e-39 seq4649 179 5e-39 seq5243 167 3e-35 seq22294 161 1e-33 seq11329 158 1e-32 seq45237 150 2e-30 seq18614 136 5e-26 seq33220 129 7e-24 seq14659 86.0 8e-11 >seq13622 Length=1463 Score = 179 bits (198), Expect = 5e-39 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 142 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 201 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 202 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 261 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 262 TGTCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTGGAAGAGATGCCCGTGTCGGGGT 321 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 322 GCACCTGCTTCAGCACCTTGTA 343 >seq4649 Length=5649 Score = 179 bits (198), Expect = 5e-39 Identities = 161/202 (80%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 5023 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 4964 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 4963 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 4904 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 4903 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 4844 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 4843 GCACCTGCTTCAGCACCTTGTA 4822 >seq5243 Length=16742 Score = 167 bits (184), Expect = 3e-35 Identities = 158/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||| | ||| | ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 9110 GCTTGGCCCGCCCGCGGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 9051 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 9050 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 8991 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 8990 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 8931 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 8930 GCACCTGCTTCAGCACCTTGTA 8909 >seq22294 Length=16079 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || || |||| |||||| ||| | ||| |||||||| ||||||||||| |||| | || Sbjct 2609 GCTTGCCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGA 2550 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||||||||| || |||||| | ||||||| || | | Sbjct 2549 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGACGCCTCGCCGGCGATGCGCTCAAAGA 2490 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2489 TGTCATTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 2430 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 2429 GCACCTGCTTCAGCACCTTGTA 2408 >seq11329 Length=31498 Score = 158 bits (174), Expect = 1e-32 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 1254355 CGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCT 1254414 ||| | ||| | ||| |||||||| ||||||||||| |||| | ||| ||| ||||| Sbjct 25123 CGCGGGGCAGCAGCAGCCGCACGGCCGTCTGGATCTCCCGCGAGGTGATGGTGGAGCGCT 25182 Query 1254415 TGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAA 1254474 |||| |||||||||| || ||||||| | ||||||| |||| ||||||||||| | Sbjct 25183 TGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGA 25242 Query 1254475 ACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGA 1254534 | |||||||||| ||| | |||| ||||||||| |||||| ||||||||||| | Sbjct 25243 AGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGATGCACCTGCTTCA 25302 Query 1254535 GCACCTTGTA 1254544 |||||||||| Sbjct 25303 GCACCTTGTA 25312 >seq45237 Length=14657 Score = 150 bits (166), Expect = 2e-30 Identities = 153/202 (76%), Gaps = 12/202 (6%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||| |||||||| | ||||||||| Sbjct 1005 GCTTGGCCAGCTCGCCGGGCAGCAGCAGCCGCACGGCCGCCTGGATCTC----------- 1053 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| |||||||||| || ||||||| | ||||||| |||| | Sbjct 1054 -CGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCGAAGA 1112 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1113 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGT 1172 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 1173 GCACCTGCTTCAGCACCTTGTA 1194 >seq18614 Length=2556 Score = 136 bits (150), Expect = 5e-26 Identities = 126/160 (79%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 1254385 GGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGG 1254444 ||||||| |||| | ||| ||| ||||||||| |||||||||| || ||||||| Sbjct 937 GGATCTCCCGCGAGGTGATGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGC 996 Query 1254445 TGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGG 1254504 | ||||||| |||| ||||||||||| || |||||||||| ||| | |||| | Sbjct 997 CGGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACG 1056 Query 1254505 AGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 |||||||| |||||| ||||||||||| ||||||||||| Sbjct 1057 AGATGCCCGTGTCGGGATGCACCTGCTTCAGCACCTTGTA 1096 >seq33220 Length=35581 Score = 129 bits (142), Expect = 7e-24 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | ||||||||| || ||||| ||||| || | | || Sbjct 17822 GCTTGGCCAGCTCTCCTGGGAGCAGCAGGCGCACAGCCGTCTGAATCTCCCGAGAGGTGA 17763 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| ||| ||| || | ||||||| || | | Sbjct 17762 TGGTGGAGCGCTTGTTGTAATGGGCCAGGCGGGAGGCTTCTCCGGCGATGCGCTCAAAGA 17703 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | ||| ||||||||| |||||||| Sbjct 17702 TGTCATTGACGAAGGAGTTCATGATGCCCATGGCTTTGGAGGAGATGCCAGTGTCGGGGT 17643 Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546 | |||||||| ||||||||||||| Sbjct 17642 GGACCTGCTTCAGCACCTTGTAGA 17619 >seq14659 Length=34158 Score = 86.0 bits (94), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 1630177 GCAAAGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAG 1630236 |||| |||||| || || || ||||||||||| || |||||||| ||||| ||||| ||| Sbjct 6900 GCAAGGCCGATCCCACCAGCAGACTTGGAGATCAGGGCGCACTGCTTGAGAGTGTCATAG 6841 Query 1630237 ATGCCCTCGATCGAGTCGGCCTTCATG 1630263 || |||||||| ||| |||||||| Sbjct 6840 ATCCCCTCGATGCTGTCATCCTTCATG 6814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6102249211734079