Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq31408 143 3e-29 seq44153 131 2e-25 seq14659 102 8e-17 >seq31408 Length=4037 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||| ||||| || ||||| ||| || ||| | || || ||| Sbjct 3196 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGC 3255 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 |||||||| || | ||||||| |||||||||||| || ||||| |||||||| |||| Sbjct 3256 TGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATC 3315 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | ||||| |||||| ||||||| || || | ||||| ||| || || Sbjct 3316 TTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTCCCT 3375 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 ||||| || || || || ||||||||| Sbjct 3376 GTCAGGGTCTTCACAAAGATCTGCATG 3402 Score = 136 bits (150), Expect = 4e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || || ||| | || || ||||||||||| Sbjct 3433 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 3492 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||||| |||||||||||| || ||||| |||||||| |||||| |||| Sbjct 3493 GCGAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 3552 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||||| |||||| ||||||| || || | ||||| ||| || || ||||| || Sbjct 3553 ACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTCTTCCCTGTCAGGGTC 3612 Query 133644 TTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 3613 TTCACAAAGATCTGCATG 3630 Score = 125 bits (138), Expect = 7e-24 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||||| |||||||| || ||||| || || ||| | || || ||||||||||| Sbjct 2976 GGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCC 3035 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||||| |||||| || || || |||||||||||||| |||||| ||| Sbjct 3036 AGCAAAGATGAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTT 3095 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||||| ||||| | ||||| || || | ||||| ||| || || ||||| || Sbjct 3096 GACATTCTCAATGGTGTCACTAGGCTCGACCTCCAGGGTGATGGTCTTCCCTGTCAGGGT 3155 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 3156 CTTCACAAAGATCTGCATG 3174 Score = 125 bits (138), Expect = 7e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || || ||| | || || ||||||||||| Sbjct 3661 GTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCA 3720 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| |||||| ||||| || |||||||||||||| |||||| ||| Sbjct 3721 GCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTC 3780 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||||| ||||| |||||||||| || | ||||| ||| ||||| ||||| || Sbjct 3781 ACATTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGTCTTGCCAGTCAGGGTC 3840 Query 133644 TTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 3841 TTCACAAAGATCTGCAT 3857 >seq44153 Length=51076 Score = 131 bits (144), Expect = 2e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||||| || ||||| || ||||| || || ||| | || || ||||| Sbjct 465 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTG 406 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || |||| |||||| ||||| || |||||||||||||| |||||| Sbjct 405 CTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 346 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||||| ||||| ||||||| || || | ||||| ||| ||||| || Sbjct 345 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGT 286 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || || |||||||||||| Sbjct 285 CAGGGTCTTCACAAAAATCTGCATG 261 Score = 131 bits (144), Expect = 2e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | |||||| || ||||| || ||||| ||| || ||| | || || ||||| Sbjct 693 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTG 634 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| || | || |||| |||||| || || || |||||||||||||| |||||| Sbjct 633 CTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 574 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||| | | ||||| ||||| |||||||||| || | ||||| ||| ||||| || Sbjct 573 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGTCTTGCCAGT 514 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 ||| || || || || ||||||||| Sbjct 513 CAGGGTCTTCACAAAGATCTGCATG 489 >seq14659 Length=34158 Score = 102 bits (112), Expect = 8e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 ||||||| || || || | |||||||||||||||||||| |||| ||||| |||| Sbjct 10291 TGTACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCCCAAGTTCTGCTGAT 10232 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCG 148983 ||||||| |||||||| | ||| ||||| ||||||||||| ||| || ||| ||| | Sbjct 10231 TGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTACGGCGTGCCGGTCTCCGTCTGAG 10172 Query 148984 TTTC 148987 ||| Sbjct 10171 ATTC 10168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483060730059880