Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq40321 123 8e-25 seq39140 123 8e-25 seq28462 118 3e-23 seq34313 111 5e-21 seq35514 105 2e-19 >seq40321 Length=144804 Score = 123 bits (136), Expect = 8e-25 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 42178 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 42119 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 42118 CCCGGGCTTCAGC 42106 >seq39140 Length=7853 Score = 123 bits (136), Expect = 8e-25 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1931 GGCTGAAGTCGCTCAGCTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 1990 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 1991 CCCGGGCTTCAGC 2003 >seq28462 Length=56818 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 14009 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 14068 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 14069 CCCGGGCTTCAGC 14081 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 27328 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 27269 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 27268 CCCGGGCTTCAGC 27256 >seq34313 Length=53365 Score = 111 bits (122), Expect = 5e-21 Identities = 67/71 (94%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 2770 CTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCC 2829 |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| Sbjct 23535 CTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGTTTCAACCC 23476 Query 2830 CGGGCTTCAGC 2840 |||||||||| Sbjct 23475 TGGGCTTCAGC 23465 >seq35514 Length=39145 Score = 105 bits (116), Expect = 2e-19 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 25109 GGCTGGAGTAGCTCAGCTGGGAGAGTGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAT 25050 Query 2828 CCCGGGCTTCAGC 2840 || |||||||||| Sbjct 25049 CCTGGGCTTCAGC 25037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15839270295615