Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq13622 197 2e-44 seq4649 197 2e-44 seq22294 185 1e-40 seq5243 185 1e-40 seq45237 168 1e-35 seq18614 150 3e-30 seq33220 143 4e-28 seq11329 143 4e-28 seq10907 86.0 9e-11 >seq13622 Length=1463 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 343 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCTTCCAAGGCCATG 290 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 289 AGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 230 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 229 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 170 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| |||||||||||||||| Sbjct 169 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCTGTCTCCGAGGGCACCA 121 >seq4649 Length=5649 Score = 197 bits (218), Expect = 2e-44 Identities = 182/229 (79%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 4822 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 4875 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 4876 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 4935 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 4936 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 4995 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| |||||||||||||||| Sbjct 4996 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCTGTCTCCGAGGGCACCA 5044 >seq22294 Length=16079 Score = 185 bits (204), Expect = 1e-40 Identities = 179/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 2408 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 2461 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||| ||||| | || ||||||| | |||||| ||| Sbjct 2462 GGCATCATGAACTCCTTCGTCAATGACATCTTTGAGCGCATCGCCGGCGAGGCGTCGCGC 2521 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 2522 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 2581 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| |||| || ||||||||||||||||||||||| Sbjct 2582 CTGCTGCTGCCCGGCGAGCTGGGCAAGCACGCCGTCTCCGAGGGCACCA 2630 >seq5243 Length=16742 Score = 185 bits (204), Expect = 1e-40 Identities = 179/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 8909 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 8962 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 8963 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 9022 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 9023 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 9082 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| | ||| | ||||| |||||| |||||||||||||||| Sbjct 9083 CTGCTGCTGCCCCGCGGGCGGGCCAAGCACGCTGTCTCCGAGGGCACCA 9131 >seq45237 Length=14657 Score = 168 bits (186), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 18/229 (8%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 1194 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 1141 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 1140 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 1081 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| |||| ||||||||| | |||||||| Sbjct 1080 CTGGCGCACTACAACAAGCGCTCCACG------------GAGATCCAGGCGGCCGTGCGG 1033 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| |||||||||||||||| Sbjct 1032 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCTGTCTCCGAGGGCACCA 984 >seq18614 Length=2556 Score = 150 bits (166), Expect = 3e-30 Identities = 170/229 (74%), Gaps = 18/229 (8%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||| ||| || || |||| || |||| ||||| Sbjct 1096 TACAAGGTGCTGAAGCAGGTGCATCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 1043 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 1042 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 983 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| |||||| || Sbjct 982 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATC------------CGG 935 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| |||||| ||||||| |||||| |||||||||||||||| Sbjct 934 CTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCTGTCTCCGAGGGCACCA 886 >seq33220 Length=35581 Score = 143 bits (158), Expect = 4e-28 Identities = 180/244 (74%), Gaps = 6/244 (2%) Strand=Plus/Plus Query 724899 TACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCC 724958 ||||| || | ||||||||||||| |||||||| |||||| || ||| ||| Sbjct 17606 TACTCCATCTATGTCTACAAGGTGCTGAAGCAGGTCCACCCCGACAC---TGGCATCTCC 17662 Query 724959 TCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGC 725018 ||||| || ||||| ||||||||||| || ||||| ||||| | || ||||||| | Sbjct 17663 TCCAA--AG-CCATGGGCATCATGAACTCCTTCGTCAATGACATCTTTGAGCGCATCGCC 17719 Query 725019 ACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATC 725078 || ||| |||||||| | | |||||||||| ||| ||| | | || ||||| Sbjct 17720 GGAGAAGCCTCCCGCCTGGCCCATTACAACAAGCGCTCCACCATCACCTCTCGGGAGATT 17779 Query 725079 CAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGC 725138 ||||| || ||||||||| | | | || || ||||||| |||||||||||| ||||| Sbjct 17780 CAGACGGCTGTGCGCCTGCTGCTCCCAGGAGAGCTGGCCAAGCACGCCGTCTCGGAGGGT 17839 Query 725139 ACCA 725142 |||| Sbjct 17840 ACCA 17843 >seq11329 Length=31498 Score = 143 bits (158), Expect = 4e-28 Identities = 150/196 (77%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||| ||| || || |||| || |||| ||||| Sbjct 25312 TACAAGGTGCTGAAGCAGGTGCATCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 25259 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 25258 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 25199 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 25198 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 25139 Query 725094 CTGATCATGCGCGGCG 725109 ||| | ||| | ||| Sbjct 25138 CTGCTGCTGCCCCGCG 25123 >seq10907 Length=223548 Score = 86.0 bits (94), Expect = 9e-11 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 || ||||||||||| || ||||| |||||| ||| | |||||||||| || || Sbjct 314 GAACCGCTGCTGCGGGACAACCCCCGCCGCTTCGTCATCTTCCCCATCCAGTATCACGAC 373 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | ||||| ||| |||||||| || ||||| ||||| || |||||||| Sbjct 374 ATTTGGCAGATGTA-CAAGAAGGCCGAAGCTTCCTTCTGGACGGCGGAGGAGGT 426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7172063924329094