Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq31408 132 4e-26 seq44153 129 5e-25 >seq31408 Length=4037 Score = 132 bits (146), Expect = 4e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || |||||| || | || |||||| || |||||||| |||| || ||| ||| | || Sbjct 3189 CAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATC 3248 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || ||||| || | || ||||||||| | |||| || ||||||||| Sbjct 3249 TTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 3308 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||| | | | | |||||||| | || ||||||| ||||| || Sbjct 3309 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGT 3368 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || |||| || |||||||| |||||||| Sbjct 3369 CTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 3401 Score = 125 bits (138), Expect = 6e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || ||| | ||| | ||| |||||| || |||||||| || | || ||| ||| | || Sbjct 3645 CAGCACAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 3704 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || ||||| |||| || |||||| || | |||| || |||||||| Sbjct 3705 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTC 3764 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | | | | ||||| || | ||||| || | ||||| || Sbjct 3765 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGT 3824 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || || |||| || |||||||| ||||||||| Sbjct 3825 CTTGCCAGTCAGGGTCTTCACAAAGATCTGCATT 3858 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || ||| | ||| | ||| |||||| || |||||||| || | || ||| ||| | || Sbjct 3417 CAGCACAAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 3476 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || || || || | || ||||||||| | |||| || ||||||||| Sbjct 3477 TTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTGTC 3536 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||| | | | | |||||||| | || ||||||| ||||| || Sbjct 3537 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGT 3596 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || |||| || |||||||| |||||||| Sbjct 3597 CTTCCCTGTCAGGGTCTTCACAAAGATCTGCAT 3629 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | || ||| ||| | || ||||||||||| || ||||| Sbjct 2983 TCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 3042 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || |||||| || | |||| || ||||||||| |||||| ||| | | | Sbjct 3043 ATGAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTC 3102 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||||| ||||| || || || |||| || |||||| Sbjct 3103 TCAATGGTGTCACTAGGCTCGACCTCCAGGGTGATGGTCTTCCCTGTCAGGGTCTTCACA 3162 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 3163 AAGATCTGCAT 3173 >seq44153 Length=51076 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| |||| |||||| ||| | || ||||||||||| || ||||| Sbjct 680 TCCTTCTGGATGTTGTAGTCGGACAAGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 621 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | | Sbjct 620 ATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 561 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | ||||| || | ||||| || || || |||| || |||||| Sbjct 560 TCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 501 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 500 AAGATCTGCAT 490 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || | || ||| ||| | || ||||||||||| || ||||| Sbjct 452 TCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 393 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || |||||| || | |||| || ||||||||| |||||| ||||| | | Sbjct 392 ATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 333 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||| || | || ||||| | ||||| || || || |||| || |||||| Sbjct 332 TCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 273 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 272 AAAATCTGCAT 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450457832021960