Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq6888 138 9e-28 seq45694 87.8 1e-12 >seq6888 Length=22335 Score = 138 bits (152), Expect = 9e-28 Identities = 144/184 (78%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 ||||||| |||| |||||||| || |||||||||||||| || || |||||||||| || Sbjct 2099 CATGTCCTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACCGGTCCCAAATC 2040 Query 30283 TCCCTCTTCCCTG-TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341 ||||| |||||| |||| ||| ||| ||| |||| || || | || || || || | Sbjct 2039 CCCCTCCTCCCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCAT 1981 Query 30342 CCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30401 |||| ||||| || ||||| ||||||||||||| | |||||| || || || || || | Sbjct 1980 CCCAAATCTTCACACCCTTTGCAGAGAGCTCTTTAGCGTTTGTAGAACC-CT-ACAAAAC 1923 Query 30402 ACAG 30405 |||| Sbjct 1922 ACAG 1919 >seq45694 Length=23859 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 110401 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 110460 || || ||||||||||| |||| || || |||||| | | ||| | |||||| || || Sbjct 3767 TTGAGTTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 3708 Query 110461 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||||||||| || ||| |||||||||||| | ||||| || ||| Sbjct 3707 ATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 3660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406015330658004