Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq6888 104 2e-17 >seq6888 Length=22335 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 34295 ACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGA 34354 || ||| | || |||||||| | ||| |||||||| ||||| ||| | || || || Sbjct 1938 ACAAACGCTAAAGAGCTCTCTGCAAAGGGTGTGAAGATTTGGGATGCTAATGGATCGCGT 1997 Query 34355 GACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTAC 34414 || || ||||| |||| ||| ||| | |||||||||| || ||||| ||||| || Sbjct 1998 GAGTTCCTGGATAAGCAGGGTTTCAGCACCAGGGAGGAGGGGGATTTGGGACCGGTTTAT 2057 Query 34415 GGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || ||||||||||| |||||||| || || || Sbjct 2058 GGTTTCCAGTGGAGGCACTTTGGAGCAGAATA 2089 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||| ||||||||||| || || ||||| ||||| || ||||||||| Sbjct 2089 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACCGGTCCCAAATCCCCCTCCTCC 2030 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | ||| ||| |||| ||||| || || || || || | ||| ||||| |||||| Sbjct 2029 CTGGTGCTGAAACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCATCCCAAATCTTC 1970 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGT 7050 || ||| | |||||||| || | ||| || Sbjct 1969 ACACCCTTTGCAGAGAGCTCTTTAGCGTTTGT 1938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447928517354640