Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq6888 107 2e-18 seq45694 87.8 1e-12 >seq6888 Length=22335 Score = 107 bits (118), Expect = 2e-18 Identities = 124/162 (77%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG-TGCTCGAA 30075 || |||||||||||||| || || |||||||||| || ||||| |||||| |||| ||| Sbjct 2077 AAGTGCCTCCACTGGAAACCATAAACCGGTCCCAAATCCCCCTCCTCCCTGGTGCT-GAA 2019 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| ||| |||| || || | || || || || ||||| ||||| || ||||| | Sbjct 2018 ACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCATCCCAAATCTTCACACCCTTTGC 1959 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAG 30177 ||||||||||| | |||||| || || || || || ||||| Sbjct 1958 AGAGAGCTCTTTAGCGTTTGTAGAACC-CT-ACAAAACACAG 1919 >seq45694 Length=23859 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343 || || ||||||||||| |||| || | |||||| | | ||| | |||||| || || Sbjct 3767 TTGAGTTCCCTGCTGAGCACTATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGGA 3708 Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||||||||| || ||| |||||||||||| | ||||| |||||| Sbjct 3707 ATGGAGAACCAGGTTTTTTTACCCATTATCAGTGCATTCTGTTTACCT 3660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405868237557082