Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq6888 129 4e-25 >seq6888 Length=22335 Score = 129 bits (142), Expect = 4e-25 Identities = 142/184 (77%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 27489 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTC 27548 ||||||| |||| |||||||| || |||||||| ||||| || || |||||||||| || Sbjct 2099 CATGTCCTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACCGGTCCCAAATC 2040 Query 27549 TCCCTCTTCCCTG-TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607 ||||| |||||| |||| ||| ||| ||| |||| || || | || || || || | Sbjct 2039 CCCCTCCTCCCTGGTGCT-GAAACCCTGCTTATCCAGGAACTCACGCGATCCATTAGCAT 1981 Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667 |||| ||||| || ||||| | ||||||||||| | |||||| || || || || || | Sbjct 1980 CCCAAATCTTCACACCCTTTGCAGAGAGCTCTTTAGCGTTTGTAGAACC-CT-ACAAAAC 1923 Query 27668 ACAG 27671 |||| Sbjct 1922 ACAG 1919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369238857751397