Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tauraco_20erythrolophus_20[refseq_20GCF_5F000709365.1_202014-06-25] 59,587 sequences; 1,155,540,733 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq31408 136 1e-26 >seq31408 Length=4037 Score = 136 bits (150), Expect = 1e-26 Identities = 164/221 (74%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || ||||| || || |||||||| ||||| || || ||| Sbjct 3626 CAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTCGA--GCCCAGCG 3569 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| |||||||| || || || || || ||||||| Sbjct 3568 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGC 3509 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || |||||||| || || ||||| |||||||| | || || | || || ||| Sbjct 3508 AGAGGCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 3449 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || || |||||||| || | || ||| Sbjct 3448 TCCAGAAGGAGTCTACTCTTCATCTTGTGCTGCGCCTGAGA 3408 Score = 131 bits (144), Expect = 4e-25 Identities = 155/207 (75%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || ||||| || || |||||||| ||||| || || ||| Sbjct 3398 CAGATCTTTGTGAAGACCCTGACAGGGAAGACCATCACCCTGGAGGTCGA--GCCCAGCG 3341 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| |||||||| || || || || || ||||||| Sbjct 3340 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCGACCAGC 3281 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | || || |||| || ||| Sbjct 3280 AGAGGCTCATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAACA 3221 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| || || || || ||||| |||| Sbjct 3220 TCCAGAAGGAGTCCACCCTGCA-CTTG 3195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202812201258878