Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq7236 120 2e-22 >seq7236 Length=503087 Score = 120 bits (132), Expect = 2e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 18960 GATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAAC 19019 ||||| || | |||| | ||||| || || | | ||||||||||| |||| ||| Sbjct 201268 GATATTTCCCTGATGGCTTTGCCTCCTTGCCATGCTCTTTGTCAGTTTTATGTTGTAAAT 201327 Query 19020 GGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTC 19079 |||||||| ||||||||| | || ||||| || || |||||||| || || || || ||| Sbjct 201328 GGTGAATTGTCCTGCCAACTCTATCAGAGGTCTGGAGATATGGGACTGGGAGTGCCCTTC 201387 Query 19080 AACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAA 19135 || ||||| | ||| |||| || || ||||| |||| ||||| ||||| || || Sbjct 201388 AATATTGCCAGCTATTCACTGCTCACATACATGATAGCCCATGTCACAGGCCTAAA 201443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399102243047130