Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq8606 95.1 1e-14 >seq8606 Length=302679 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || |||||||| ||| || |||| |||||| || || || ||| Sbjct 263372 GTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTGCTTGCCA 263313 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| ||||||| | |||||||| || || |||||||| ||||| || || || Sbjct 263312 GCAAAGATCAGCCTCTGCTGATCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 263253 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | ||| | ||||| | || || || |||| ||| | ||||||||||||| || Sbjct 263252 ACATTTTCAATAGTGTCGCTAGGCTCGACCTCAAGAGTGATGGTCTTGCCGGTCAGGGTC 263193 Query 143168 TTTACGAATATTTGCAT 143184 || || || || ||||| Sbjct 263192 TTCACAAAGATCTGCAT 263176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506491452672480