Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq7236 102 6e-17 >seq7236 Length=503087 Score = 102 bits (112), Expect = 6e-17 Identities = 130/174 (75%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 25783 TACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCC 25842 || ||||| || || | |||||||||||| || || || ||||| | || || ||||| Sbjct 198495 TATTCTGCCCCAAAGTGCCTCCACTGGAAACCATAAACGGGTCCCAAATCACCCTCTTCT 198436 Query 25843 CTG-TGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTT 25901 ||| ||| ||| ||| |||||||| || || | || |||||||| ||||| ||||| Sbjct 198435 CTGTTGCAGAAA-CCCTGCTTATCCAGGAACTCACGTGAGCCATTGGCATCCCAAATCTT 198377 Query 25902 TACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAG 25955 || ||||| | ||||| ||||||| ||||| || || || || || ||||| Sbjct 198376 CACACCCTTTGCAGAGAGTTCTTTGGCATTTGTAGAACC-CT-ACAAAACACAG 198325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339795544236522