Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3229 84.2 2e-11 >seq3229 Length=117486 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 ||||| || || || || | ||| || |||||||||||||||||||| || |||||||| Sbjct 48445 GAGGGCAAGATGCATGGCTTCCTGCGGATGTACTGGGCCAAAAAGATCCTGGAGTGGACA 48504 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 | | || ||| |||| || ||| | | || || || || ||| | ||| || ||| Sbjct 48505 CGCTCCCCTGAGGAGGCTCTGCAGTTTGCCATCTACCTCAATGATCGCTACGAGCTGGAC 48564 Query 71837 GGTCGCGATCCTAACGGTTATGTCGG 71862 || | ||||| ||||| || || || Sbjct 48565 GGGAGGGATCCCAACGGATACGTAGG 48590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478168695634080