Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5912 96.9 3e-15 >seq5912 Length=13300 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || |||||| || ||||| ||||||||||| || || ||||||| | || || ||| | Sbjct 9345 AAAAATGCAGATTTTTGTGAAGACTTTGACAGGGAAGACCATCACCTTGGAGGTTGAGCC 9286 Query 25055 GTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||| || ||| | ||| || ||| || || ||||| || || || || Sbjct 9285 TAGTGACACCATTGAGAATGTCAAGGCCAAGATCCAGGATAAGGAAGGTATCCCCCCAGA 9226 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| || | || ||||| ||||| || | ||||||| ||||| || ||| || Sbjct 9225 TCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTA 9166 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || || ||||| || || | ||||| Sbjct 9165 CAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCT 9130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432892228300910