Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tinamus_20guttatus_20[refseq_20GCF_5F000705375.1_202014-08-05] 82,514 sequences; 1,047,056,493 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq10844 120 5e-22 >seq10844 Length=18256 Score = 120 bits (132), Expect = 5e-22 Identities = 117/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||||||||| | ||||||| | ||||||| |||||| || || |||| Sbjct 1007 CCTGCTTCCACCCGTAGAAGTGCATGCTGGTGAGTTTGCCGTAGTTGGGCTCTGCGATGT 1066 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||| ||||||||||| ||||| ||||||| | | ||||| ||||| |||| | Sbjct 1067 GGATGTTGAGAGACTGGCTCTGGTCAATGAAAGCTCCTCTGTCTGCTGCCATCTTGAGGA 1126 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 |||| ||||| || ||||||||||| ||||| Sbjct 1127 TGGTTTTCTGGGAGATCTCCCACACGGTCTT 1157 Score = 89.7 bits (98), Expect = 8e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 |||||||||||| ||||||| ||| | |||||| | ||||| | ||||||||| Sbjct 6825 CTCCACGATCTCCGTGCACAGGTTGCTGCACTTGATGGTCCCCAGGTTCTGCTGGTTGCT 6884 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA 204999 ||||||||| |||||||||||||| | |||| | || | || ||||| |||| || Sbjct 6885 CTTGCGGTTGCAGGAGTCCTTGTAGAGCATGTAGGGGGTGCCCGTCTCCGTCTGCGA 6941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794335057047840